RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 IFT74Q96LB3 600 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 RBM47A0AV96 593 aaKnown RBP22.09■■□□□ 1.13
NECAB3-213ENST00000488489 LRRC53A6NM62 1247 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 ACTN1P12814 892 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 DRP2Q13474 957 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 TAF1CQ15572 869 aaPredicted RBP22.09■■□□□ 1.13
NECAB3-213ENST00000488489 ELF2Q15723 593 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 SLC39A4Q6P5W5 647 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 TRIM65Q6PJ69 517 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 BBXQ8WY36 941 aaPredicted RBP22.09■■□□□ 1.13
NECAB3-213ENST00000488489 HVCN1Q96D96 273 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 NLRC4Q9NPP4 1024 aa22.09■■□□□ 1.13
NECAB3-213ENST00000488489 EMSYQ7Z589 1322 aa22.08■■□□□ 1.13
NECAB3-213ENST00000488489 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.08■■□□□ 1.13
NECAB3-213ENST00000488489 SLC10A3P09131 477 aa22.08■■□□□ 1.13
NECAB3-213ENST00000488489 RFC5P40937 340 aa22.08■■□□□ 1.13
NECAB3-213ENST00000488489 PLCB4Q15147 1175 aa22.08■■□□□ 1.13
NECAB3-213ENST00000488489 EDEM3Q9BZQ6 932 aa22.08■■□□□ 1.13
NECAB3-213ENST00000488489 CEP72Q9P209 647 aa22.08■■□□□ 1.13
NECAB3-213ENST00000488489 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.08■■□□□ 1.135e-7■■■□□ 17.2
NECAB3-213ENST00000488489 ZHX1Q9UKY1 873 aaPredicted RBP22.08■■□□□ 1.13
NECAB3-213ENST00000488489 EPN1Q9Y6I3 576 aaPredicted RBP22.08■■□□□ 1.13
NECAB3-213ENST00000488489 V9GYY5 206 aaPredicted RBP22.08■■□□□ 1.13
NECAB3-213ENST00000488489 MAFO75444 373 aaPredicted RBP22.07■■□□□ 1.12
NECAB3-213ENST00000488489 TRIM49P0CI25 452 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 TRIM49CP0CI26 452 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 PON1P27169 355 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 POLR2FP61218 127 aaKnown RBP22.07■■□□□ 1.12
NECAB3-213ENST00000488489 SNRPFP62306 86 aaKnown RBP22.07■■□□□ 1.12
NECAB3-213ENST00000488489 EXOC3L4Q17RC7 722 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 CACNA2D4Q7Z3S7 1137 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 IFNL1Q8IU54 200 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 GPIHBP1Q8IV16 184 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 XXYLT1Q8NBI6 393 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 ATP8B4Q8TF62 1192 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 FAM167AQ96KS9 214 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 TINF2Q9BSI4 451 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 GANQ9H2C0 597 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 EXOC7Q9UPT5 735 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 FAM155AB1AL88 458 aaPredicted RBP22.07■■□□□ 1.12
NECAB3-213ENST00000488489 NDUFA10O95299 355 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 PLEKP08567 350 aaPredicted RBP22.07■■□□□ 1.12
NECAB3-213ENST00000488489 GABPB1Q06547 395 aaPredicted RBP22.07■■□□□ 1.12
NECAB3-213ENST00000488489 BFSP1Q12934 665 aa22.07■■□□□ 1.12
NECAB3-213ENST00000488489 ZNHIT6Q9NWK9 470 aaKnown RBP22.07■■□□□ 1.12
NECAB3-213ENST00000488489 REXO2Q9Y3B8 237 aaKnown RBP22.07■■□□□ 1.12
NECAB3-213ENST00000488489 SLC15A5A6NIM6 579 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 DLG4P78352 724 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 CDK17Q00537 523 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 LAMC2Q13753 1193 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 PPP2R5AQ15172 486 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 CBWD6Q4V339 395 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 CBWD3Q5JTY5 395 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 CBWD5Q5RIA9 395 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 PDXDC1Q6P996 788 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 FBXO38Q6PIJ6 1188 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 SYT10Q6XYQ8 523 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 NHEJ1Q9H9Q4 299 aaPredicted RBP22.06■■□□□ 1.12
NECAB3-213ENST00000488489 ZCCHC17Q9NP64 241 aaKnown RBP22.06■■□□□ 1.12
NECAB3-213ENST00000488489 USP20Q9Y2K6 914 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 GOLGA8IPA6NC78 632 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 GOLGA8JA6NMD2 632 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 FANCGO15287 622 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 FMO5P49326 533 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 MKRN4PQ13434 485 aaPredicted RBP22.06■■□□□ 1.12
NECAB3-213ENST00000488489 SMARCAD1Q9H4L7 1026 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 PLCB1Q9NQ66 1216 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 ARHGAP20Q9P2F6 1191 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 TLL2Q9Y6L7 1015 aa22.06■■□□□ 1.12
NECAB3-213ENST00000488489 GH1P01241 217 aa22.05■■□□□ 1.12
NECAB3-213ENST00000488489 NAMPTP43490 491 aa22.05■■□□□ 1.12
NECAB3-213ENST00000488489 MORN1Q5T089 497 aa22.05■■□□□ 1.12
NECAB3-213ENST00000488489 C17orf99Q6UX52 265 aa22.05■■□□□ 1.12
NECAB3-213ENST00000488489 GBP6Q6ZN66 633 aa22.05■■□□□ 1.12
NECAB3-213ENST00000488489 PLEKHO2Q8TD55 490 aa22.05■■□□□ 1.12
NECAB3-213ENST00000488489 RNPEPQ9H4A4 650 aa22.05■■□□□ 1.12
NECAB3-213ENST00000488489 GCNT4Q9P109 453 aa22.05■■□□□ 1.12
NECAB3-213ENST00000488489 GTPBP10A4D1E9 387 aaKnown RBP22.04■■□□□ 1.12
NECAB3-213ENST00000488489 TLR2O60603 784 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 ABL1P00519 1130 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 ETF1P62495 437 aaKnown RBP22.04■■□□□ 1.12
NECAB3-213ENST00000488489 KLHDC7AQ5VTJ3 777 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 AFG1LQ8WV93 481 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 TRAPPC12Q8WVT3 735 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 SAAL1Q96ER3 474 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 ZIC5Q96T25 663 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 SIX2Q9NPC8 291 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 LZTFL1Q9NQ48 299 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 PHLPP2Q6ZVD8 1323 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 LRRIQ4A6NIV6 560 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 HNRNPDLO14979 420 aaKnown RBP22.04■■□□□ 1.12
NECAB3-213ENST00000488489 ADRB2P07550 413 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 SMPD1P17405 629 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 SLC26A2P50443 739 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 ACVR2BQ13705 512 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 BRDTQ58F21 947 aaPredicted RBP22.04■■□□□ 1.12
NECAB3-213ENST00000488489 C1orf220Q5T0J3 134 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 INTS8Q75QN2 995 aaKnown RBP22.04■■□□□ 1.12
NECAB3-213ENST00000488489 CBWD2Q8IUF1 395 aa22.04■■□□□ 1.12
NECAB3-213ENST00000488489 PRPF31Q8WWY3 499 aaKnown RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms