RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 SPATA31D3P0C874 917 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 CLK2P49760 499 aaKnown RBP18.45■□□□□ 0.54
TOM1-214ENST00000487670 NAPAP54920 295 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 ST3GAL2Q16842 350 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 NOMO2Q5JPE7 1267 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 PHLDB3Q6NSJ2 640 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 ZC3H14Q6PJT7 736 aaKnown RBP18.45■□□□□ 0.54
TOM1-214ENST00000487670 NFXL1Q6ZNB6 911 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 C15orf39Q6ZRI6 1047 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 FAM43BQ6ZT52 329 aaPredicted RBP18.45■□□□□ 0.54
TOM1-214ENST00000487670 SPATA31D4Q6ZUB0 917 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 MAP7D2Q96T17 732 aa18.45■□□□□ 0.54
TOM1-214ENST00000487670 MTF2Q9Y483 593 aaPredicted RBP18.45■□□□□ 0.54
TOM1-214ENST00000487670 IPO5O00410 1097 aaKnown RBP18.44■□□□□ 0.54
TOM1-214ENST00000487670 HTR4Q13639 388 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 GIT2Q14161 759 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 BMS1Q14692 1282 aaKnown RBP18.44■□□□□ 0.54
TOM1-214ENST00000487670 GET4Q7L5D6 327 aaPredicted RBP18.44■□□□□ 0.54
TOM1-214ENST00000487670 PPFIBP1Q86W92 1011 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 NLRP7Q8WX94 980 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 SCLT1Q96NL6 688 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 SH2D3AQ9BRG2 576 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 PARD6AQ9NPB6 346 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 MARCH5Q9NX47 278 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 SPEGQ15772 3267 aa18.44■□□□□ 0.54
TOM1-214ENST00000487670 COL4A2P08572 1712 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 KINO60870 393 aaKnown RBP18.43■□□□□ 0.54
TOM1-214ENST00000487670 TGM1P22735 817 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 ZNF76P36508 570 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 GNAQP50148 359 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 VARS2Q5ST30 1063 aaKnown RBP18.43■□□□□ 0.54
TOM1-214ENST00000487670 JAKMIP3Q5VZ66 844 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 DCLRE1AQ6PJP8 1040 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 MICU3Q86XE3 530 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 CRYGNQ8WXF5 182 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 NCDNQ9UBB6 729 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 NUMBLQ9Y6R0 609 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 PDCD11Q14690 1871 aaKnown RBP18.43■□□□□ 0.54
TOM1-214ENST00000487670 TICRRQ7Z2Z1 1910 aa18.43■□□□□ 0.54
TOM1-214ENST00000487670 CNOT1A5YKK6 2376 aaKnown RBP18.42■□□□□ 0.54
TOM1-214ENST00000487670 CCDC69A6NI79 296 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 TEX28O15482 410 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 ADCY7P51828 1080 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 PRKCEQ02156 737 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 RNASELQ05823 741 aaKnown RBP18.42■□□□□ 0.54
TOM1-214ENST00000487670 TWF2Q6IBS0 349 aaKnown RBP18.42■□□□□ 0.54
TOM1-214ENST00000487670 AGMOQ6ZNB7 445 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 NIPA1Q7RTP0 329 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 CMASQ8NFW8 434 aaPredicted RBP18.42■□□□□ 0.54
TOM1-214ENST00000487670 SMG7Q92540 1137 aaKnown RBP18.42■□□□□ 0.54
TOM1-214ENST00000487670 B3GALT6Q96L58 329 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 EMILIN2Q9BXX0 1053 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 FAM105AQ9NUU6 356 aa18.42■□□□□ 0.54
TOM1-214ENST00000487670 PIN4Q9Y237 131 aaKnown RBP18.42■□□□□ 0.54
TOM1-214ENST00000487670 LAMA1P25391 3075 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 ZZEF1O43149 2961 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 A0A087WZ62 844 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 ANHXE9PGG2 379 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 MAGEB2O15479 319 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 OATP04181 439 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 CHMLP26374 656 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 AK2P54819 239 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 FUT2Q10981 343 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 ZNF746Q6NUN9 644 aaPredicted RBP18.41■□□□□ 0.54
TOM1-214ENST00000487670 TSSK4Q6SA08 328 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 CASC1Q6TDU7 716 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 KSR1Q8IVT5 923 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 FGF14Q92915 247 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 GJA10Q969M2 543 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 FDXACB1Q9BRP7 624 aaPredicted RBP18.41■□□□□ 0.54
TOM1-214ENST00000487670 ZNF577Q9BSK1 485 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 DACT1Q9NYF0 836 aa18.41■□□□□ 0.54
TOM1-214ENST00000487670 RBM8AQ9Y5S9 174 aaKnown RBP18.41■□□□□ 0.54
TOM1-214ENST00000487670 SMCO2A6NFE2 343 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 NRP1O14786 923 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 LAMP2P13473 410 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 CD72P21854 359 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 GPC5P78333 572 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 SNW1Q13573 536 aaKnown RBP18.4■□□□□ 0.54
TOM1-214ENST00000487670 GLB1LQ6UWU2 654 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 GLYCTKQ8IVS8 523 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 FANCBQ8NB91 859 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 CEP89Q96ST8 783 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 SLC2A4RGQ9NR83 387 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 SMG5Q9UPR3 1016 aaKnown RBP18.4■□□□□ 0.54
TOM1-214ENST00000487670 PRG3Q9Y2Y8 225 aaPredicted RBP18.4■□□□□ 0.54
TOM1-214ENST00000487670 PCDHA10Q9Y5I2 948 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 TRIP11Q15643 1979 aa18.4■□□□□ 0.54
TOM1-214ENST00000487670 EDIL3O43854 480 aa18.39■□□□□ 0.53
TOM1-214ENST00000487670 PSAPP07602 524 aa18.39■□□□□ 0.53
TOM1-214ENST00000487670 STARD6P59095 220 aa18.39■□□□□ 0.53
TOM1-214ENST00000487670 CSTF1Q05048 431 aaKnown RBP18.39■□□□□ 0.53
TOM1-214ENST00000487670 PARM1Q6UWI2 310 aa18.39■□□□□ 0.53
TOM1-214ENST00000487670 LENG9Q96B70 501 aa18.39■□□□□ 0.53
TOM1-214ENST00000487670 RPS6KC1Q96S38 1066 aa18.39■□□□□ 0.53
TOM1-214ENST00000487670 HERC2P3Q9BVR0 1158 aa18.39■□□□□ 0.53
TOM1-214ENST00000487670 MRPL17Q9NRX2 175 aaKnown RBP18.39■□□□□ 0.53
TOM1-214ENST00000487670 SPATA6Q9NWH7 488 aaPredicted RBP18.39■□□□□ 0.53
TOM1-214ENST00000487670 CEP131Q9UPN4 1083 aa18.39■□□□□ 0.53
TOM1-214ENST00000487670 SGSM2O43147 1006 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms