RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 C17orf53Q8N3J3 647 aaPredicted RBP16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 RETREG2Q8NC44 543 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 AFG1LQ8WV93 481 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 ERGIC2Q96RQ1 377 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 FIZ1Q96SL8 496 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 LBHD1Q9BQE6 289 aaPredicted RBP16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 NDST4Q9H3R1 872 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 BCAS3Q9H6U6 928 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 POLD4Q9HCU8 107 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 IGSF9BQ9UPX0 1349 aa16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 RANBP2P49792 3224 aaKnown RBP16.02■□□□□ 0.15
POLR2J3-204ENST00000486319 ARHGAP6O43182 974 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 OFD1O75665 1012 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 CLTBP09497 229 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 PLS3P13797 630 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 CASP14P31944 242 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 HOXD13P35453 343 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 MAGEA10P43363 369 aaPredicted RBP16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 PURAQ00577 322 aaKnown RBP16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 SP4Q02446 784 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 ARHGAP1Q07960 439 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 LAMC2Q13753 1193 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 XKR3Q5GH77 459 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 UTP14CQ5TAP6 766 aaKnown RBP16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 CPLX3Q8WVH0 158 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 ZNF302Q9NR11 478 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 ALPK3Q96L96 1907 aa16.01■□□□□ 0.15
POLR2J3-204ENST00000486319 CCP110O43303 1012 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 ZNF862O60290 1169 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 STBD1O95210 358 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 GOLGA8FQ08AF8 430 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 GOLGA8DPQ0D2H9 430 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 FAAP100Q0VG06 881 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 CEP135Q66GS9 1140 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 PLA2G4FQ68DD2 849 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 METTL7BQ6UX53 244 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 HS2ST1Q7LGA3 356 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 TMEM139Q8IV31 216 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 GOLGA5Q8TBA6 731 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 EMID1Q96A84 441 aaPredicted RBP16■□□□□ 0.15
POLR2J3-204ENST00000486319 CEP170P1Q96L14 293 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 GDF15Q99988 308 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 MTG1Q9BT17 334 aaPredicted RBP16■□□□□ 0.15
POLR2J3-204ENST00000486319 STRA6Q9BX79 667 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 SEZ6LQ9BYH1 1024 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 ST6GALNAC4Q9H4F1 302 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 C17orf75Q9HAS0 396 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 PDLIM7Q9NR12 457 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 TMEM39AQ9NV64 488 aa16■□□□□ 0.15
POLR2J3-204ENST00000486319 MAFBQ9Y5Q3 323 aaPredicted RBP16■□□□□ 0.15
POLR2J3-204ENST00000486319 IGKV6D-21A0A0A0MT36 114 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 TRIM43BA6NCK2 446 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 K7ENM7 598 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 SLC16A3O15427 465 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 PPP1R37O75864 691 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 DGAT1O75907 488 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 NR3C1P04150 777 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 NPEPPSP55786 919 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 PRKCEQ02156 737 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 PPP2R3AQ06190 1150 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 DGKDQ16760 1214 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 ZC2HC1CQ53FD0 456 aaPredicted RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 FIGNQ5HY92 759 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 HABP4Q5JVS0 413 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 CELF3Q5SZQ8 465 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 MAEAQ7L5Y9 396 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 FRMD5Q7Z6J6 570 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 TRIM59Q8IWR1 403 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 SLC43A3Q8NBI5 491 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 MCPH1Q8NEM0 835 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 PPTC7Q8NI37 304 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 KIFAP3Q92845 792 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 TRIM43Q96BQ3 446 aaPredicted RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 PRO3102Q9H379 93 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 TMEM206Q9H813 350 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 MLXIPQ9HAP2 919 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 METTL14Q9HCE5 456 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 SEPT9Q9UHD8 586 aaPredicted RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 GRIN2DO15399 1336 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 ZMYM2Q9UBW7 1377 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 TMEM150BA6NC51 233 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 TLR3O15455 904 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 TGFB1I1O43294 461 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 SORBS3O60504 671 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 GGPS1O95749 300 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 MMP3P08254 477 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 BMP8BP34820 402 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 FXR1P51114 621 aaKnown RBP eCLIP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 SYCP1Q15431 976 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 DNTTIP2Q5QJE6 756 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 FAM102BQ5T8I3 360 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 FAM160B1Q5W0V3 765 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 FAM126BQ8IXS8 530 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 CCAR2Q8N163 923 aaKnown RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 SEPT1Q8WYJ6 367 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 PCMTD1Q96MG8 357 aaPredicted RBP15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 SPATA33Q96N06 139 aa15.99■□□□□ 0.15
POLR2J3-204ENST00000486319 GBP3Q9H0R5 595 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms