RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 HSPBAP1Q96EW2 488 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 WDR92Q96MX6 357 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 ADAM29Q9UKF5 820 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 NOB1Q9ULX3 412 aaKnown RBP7.56□□□□□ -1.2
SF3B1-210ENST00000482158 SYNPO2Q9UMS6 1093 aa7.56□□□□□ -1.2
SF3B1-210ENST00000482158 NRP2O60462 931 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 TMEM127O75204 238 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 LY86O95711 162 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 ADKP55263 362 aaKnown RBP7.55□□□□□ -1.2
SF3B1-210ENST00000482158 PPP3CAQ08209 521 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 MGAT5Q09328 741 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 PCOLCEQ15113 449 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 NXNQ6DKJ4 435 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 TCEAL8Q8IYN2 117 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 IFNL2Q8IZJ0 200 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 KLHL36Q8N4N3 616 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 PIK3C3Q8NEB9 887 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 FATE1Q969F0 183 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 KIAA1683Q9H0B3 1180 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 DMRT3Q9NQL9 472 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 PNMA8BQ9ULN7 279 aaPredicted RBP7.55□□□□□ -1.2
SF3B1-210ENST00000482158 VWA7Q9Y334 891 aa7.55□□□□□ -1.2
SF3B1-210ENST00000482158 NUAK1O60285 661 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 CYP1A1P04798 512 aaPredicted RBP7.54□□□□□ -1.2
SF3B1-210ENST00000482158 C8AP07357 584 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 GAAP10253 952 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 XPAP23025 273 aaPredicted RBP7.54□□□□□ -1.2
SF3B1-210ENST00000482158 SLURP1P55000 103 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 MALLQ13021 153 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 ADAM15Q13444 863 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 KLHDC10Q6PID8 442 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 BTNL9Q6UXG8 535 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 GPR155Q7Z3F1 870 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 CLEC14AQ86T13 490 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 GLB1L2Q8IW92 636 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 GLB1L3Q8NCI6 653 aaPredicted RBP7.54□□□□□ -1.2
SF3B1-210ENST00000482158 COA7Q96BR5 231 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 NUP88Q99567 741 aaPredicted RBP7.54□□□□□ -1.2
SF3B1-210ENST00000482158 CARD11Q9BXL7 1154 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 ZBTB21Q9ULJ3 1066 aa7.54□□□□□ -1.2
SF3B1-210ENST00000482158 C2orf78A6NCI8 922 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 IL33O95760 270 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 EDNRBP24530 442 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 MCAMP43121 646 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 MRE11P49959 708 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 NRG3P56975 720 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 TBR1Q16650 682 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 ABHD15Q6UXT9 468 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 C14orf80Q86SX3 495 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 TMEM151BQ8IW70 566 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 THEMISQ8N1K5 641 aaPredicted RBP7.53□□□□□ -1.2
SF3B1-210ENST00000482158 MYO1HQ8N1T3 1032 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 MAGEB6Q8N7X4 407 aa7.53□□□□□ -1.2
SF3B1-210ENST00000482158 CTDP1Q9Y5B0 961 aaPredicted RBP7.53□□□□□ -1.2
SF3B1-210ENST00000482158 FSBPO95073 299 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 LPOP22079 712 aaPredicted RBP7.52□□□□□ -1.21
SF3B1-210ENST00000482158 WASP42768 502 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 FXR1P51114 621 aaKnown RBP eCLIP7.52□□□□□ -1.215e-6■■■□□ 17
SF3B1-210ENST00000482158 RRADP55042 308 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 KIF23Q02241 960 aaPredicted RBP7.52□□□□□ -1.21
SF3B1-210ENST00000482158 TCIRG1Q13488 830 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 USP10Q14694 798 aaKnown RBP7.52□□□□□ -1.21
SF3B1-210ENST00000482158 PKN1Q16512 942 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 RRP12Q5JTH9 1297 aaKnown RBP7.52□□□□□ -1.21
SF3B1-210ENST00000482158 LMBR1LQ6UX01 489 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 EPM2AIP1Q7L775 607 aaPredicted RBP7.52□□□□□ -1.21
SF3B1-210ENST00000482158 C1QL4Q86Z23 238 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 WDR75Q8IWA0 830 aaKnown RBP7.52□□□□□ -1.21
SF3B1-210ENST00000482158 RTKN2Q8IZC4 609 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 UNC5BQ8IZJ1 945 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 MSL3Q8N5Y2 521 aaKnown RBP7.52□□□□□ -1.21
SF3B1-210ENST00000482158 OR2I1PQ8NGU4 316 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 NRG4Q8WWG1 115 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 GREM2Q9H772 168 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 ANLNQ9NQW6 1124 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 LIMCH1Q9UPQ0 1083 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 IPPQ9Y573 584 aa7.52□□□□□ -1.21
SF3B1-210ENST00000482158 CT47B1P0C2W7 299 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-210ENST00000482158 CTSSP25774 331 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 MLC1Q15049 377 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 MAN2A1Q16706 1144 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 MUM1L1Q5H9M0 696 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 AGBL4Q5VU57 503 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 TCERG1LQ5VWI1 586 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 CXorf57Q6NSI4 855 aaKnown RBP7.51□□□□□ -1.21
SF3B1-210ENST00000482158 TTC8Q8TAM2 541 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 RIN2Q8WYP3 895 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-210ENST00000482158 HOXB13Q92826 284 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-210ENST00000482158 GFM2Q969S9 779 aaKnown RBP7.51□□□□□ -1.21
SF3B1-210ENST00000482158 LCORQ96JN0 433 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-210ENST00000482158 C8orf48Q96LL4 319 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 BARX1Q9HBU1 254 aaPredicted RBP7.51□□□□□ -1.21
SF3B1-210ENST00000482158 ZDHHC9Q9Y397 364 aa7.51□□□□□ -1.21
SF3B1-210ENST00000482158 HTRA2O43464 458 aaPredicted RBP7.5□□□□□ -1.21
SF3B1-210ENST00000482158 NOBOXO60393 691 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 POU2F2P09086 479 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 LTA4HP09960 611 aaKnown RBP7.5□□□□□ -1.21
SF3B1-210ENST00000482158 AKAP5P24588 427 aa7.5□□□□□ -1.21
SF3B1-210ENST00000482158 CFPP27918 469 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms