RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 SNX14Q9Y5W7 946 aa10.21□□□□□ -0.77
HLA-B-253ENST00000481849 MRPL42Q9Y6G3 142 aaKnown RBP10.21□□□□□ -0.77
HLA-B-253ENST00000481849 MYH7BA7E2Y1 1941 aa10.21□□□□□ -0.78
HLA-B-253ENST00000481849 IGLV3-22A0A075B6J6 115 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 SMIM35A0A1B0GVV1 85 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 IPO5O00410 1097 aaKnown RBP10.2□□□□□ -0.78
HLA-B-253ENST00000481849 DGKIO75912 1065 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 ATG7O95352 703 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 GTF2F1P35269 517 aaKnown RBP eCLIP10.2□□□□□ -0.78
HLA-B-253ENST00000481849 AKAP17AQ02040 695 aaKnown RBP10.2□□□□□ -0.78
HLA-B-253ENST00000481849 PRR16Q569H4 304 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 PRRC2BQ5JSZ5 2229 aaKnown RBP10.2□□□□□ -0.78
HLA-B-253ENST00000481849 MIS18BP1Q6P0N0 1132 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 BLOC1S2Q6QNY1 142 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 ABHD15Q6UXT9 468 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 LURAP1LQ8IV03 231 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 FAM178BQ8IXR5 827 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 GJD3Q8N144 294 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 NEK9Q8TD19 979 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 ATP8B4Q8TF62 1192 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 ZNF689Q96CS4 500 aaPredicted RBP10.2□□□□□ -0.78
HLA-B-253ENST00000481849 SLC26A6Q9BXS9 759 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 TMX1Q9H3N1 280 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 C6orf50Q9HD87 102 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 TCEAL9Q9UHQ7 104 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 LRFN2Q9ULH4 789 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 IGSF9BQ9UPX0 1349 aa10.2□□□□□ -0.78
HLA-B-253ENST00000481849 DOCK5Q9H7D0 1870 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 IGKV6D-21A0A0A0MT36 114 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 CCDC196A0A1B0GTZ2 297 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 C5orf67F2Z3F1 127 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 DHX15O43143 795 aaKnown RBP10.19□□□□□ -0.78
HLA-B-253ENST00000481849 HBP1O60381 514 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 MGEA5O60502 916 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 RPLP2P05387 115 aaKnown RBP10.19□□□□□ -0.78
HLA-B-253ENST00000481849 RB1P06400 928 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 STAG3L1P0CL83 205 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 ATP4AP20648 1035 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 RPS6KB1P23443 525 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 HSPA4P34932 840 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 SLC26A2P50443 739 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 RCAN1P53805 252 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 CCT2P78371 535 aaKnown RBP10.19□□□□□ -0.78
HLA-B-253ENST00000481849 HYAL1Q12794 435 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 PKN1Q16512 942 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 NIPA1Q7RTP0 329 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 NPAS4Q8IUM7 802 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 KIAA0319LQ8IZA0 1049 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 REXO1Q8N1G1 1221 aaKnown RBP10.19□□□□□ -0.78
HLA-B-253ENST00000481849 METTL13Q8N6R0 699 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 PABPC5Q96DU9 382 aaKnown RBP10.19□□□□□ -0.78
HLA-B-253ENST00000481849 FTHL17Q9BXU8 183 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 NCOA5Q9HCD5 579 aaKnown RBP10.19□□□□□ -0.78
HLA-B-253ENST00000481849 VPS54Q9P1Q0 977 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 NOC2LQ9Y3T9 749 aaKnown RBP10.19□□□□□ -0.78
HLA-B-253ENST00000481849 RWDD3Q9Y3V2 267 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 SAMM50Q9Y512 469 aa10.19□□□□□ -0.78
HLA-B-253ENST00000481849 DENND3A2RUS2 1198 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 ZBTB42B2RXF5 422 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 LINC01565O15544 149 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 PRPF3O43395 683 aaKnown RBP10.18□□□□□ -0.78
HLA-B-253ENST00000481849 RPS6KA5O75582 802 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 VTNP04004 478 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 CYP3A4P08684 503 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 DNAJB1P25685 340 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 DLX2Q07687 328 aaPredicted RBP10.18□□□□□ -0.78
HLA-B-253ENST00000481849 KIZQ2M2Z5 673 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 ZNF484Q5JVG2 852 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 SPOUT1Q5T280 376 aaKnown RBP10.18□□□□□ -0.78
HLA-B-253ENST00000481849 Q6ZVU0 165 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 TEX2Q8IWB9 1127 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 CMTR2Q8IYT2 770 aaKnown RBP10.18□□□□□ -0.78
HLA-B-253ENST00000481849 NME8Q8N427 588 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 KLHL23Q8NBE8 558 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 CCDC12Q8WUD4 166 aaPredicted RBP10.18□□□□□ -0.78
HLA-B-253ENST00000481849 TMEM40Q8WWA1 233 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 KCNB2Q92953 911 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 CLP1Q92989 425 aaKnown RBP10.18□□□□□ -0.78
HLA-B-253ENST00000481849 CCDC136Q96JN2 1154 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 ZNF668Q96K58 619 aaPredicted RBP10.18□□□□□ -0.78
HLA-B-253ENST00000481849 OSMRQ99650 979 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 ADAM2Q99965 735 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 ZMYND12Q9H0C1 365 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 LMAN2LQ9H0V9 348 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 ERVK-5Q9HDB9 667 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 GABBR1Q9UBS5 961 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 PLAGL2Q9UPG8 496 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 PCDHB7Q9Y5E2 793 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 PCDHGC5Q9Y5F6 944 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 SQORQ9Y6N5 450 aa10.18□□□□□ -0.78
HLA-B-253ENST00000481849 ESYT2A0FGR8 921 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 TBKBP1A7MCY6 615 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 CHMP2AO43633 222 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 C22orf31O95567 290 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 MMP1P03956 469 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 ITGB1P05556 798 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 PSAPP07602 524 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 GNA11P29992 359 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 IRS1P35568 1242 aa10.17□□□□□ -0.78
HLA-B-253ENST00000481849 LTBRP36941 435 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms