RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 INPP5FQ9Y2H2 1132 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 UBIAD1Q9Y5Z9 338 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 NOTCH4Q99466 2003 aa14.01□□□□□ -0.17
HDAC8-217ENST00000478743 HELZ2Q9BYK8 2649 aaKnown RBP14.01□□□□□ -0.17
HDAC8-217ENST00000478743 PALM3A6NDB9 673 aaPredicted RBP14□□□□□ -0.17
HDAC8-217ENST00000478743 CHURC1-FNTBB4DL54 471 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 MEIS2O14770 477 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 TEX28O15482 410 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 PAPLNO95428 1278 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 FNTBP49356 437 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 RBM25P49756 843 aaKnown RBP14□□□□□ -0.17
HDAC8-217ENST00000478743 STAT5BP51692 787 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 CLCN3P51790 818 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 ACTR2P61160 394 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 MTMR1Q13613 665 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 ODR4Q5SWX8 454 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 STPG1Q5TH74 334 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 FAM160A2Q8N612 972 aaPredicted RBP14□□□□□ -0.17
HDAC8-217ENST00000478743 BBC3Q96PG8 261 aaPredicted RBP14□□□□□ -0.17
HDAC8-217ENST00000478743 FAM126AQ9BYI3 521 aaPredicted RBP14□□□□□ -0.17
HDAC8-217ENST00000478743 NT5C3AQ9H0P0 336 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 AZI2Q9H6S1 392 aa14□□□□□ -0.17
HDAC8-217ENST00000478743 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14□□□□□ -0.17
HDAC8-217ENST00000478743 A0A0U1RQF3 1178 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 CSDE1O75534 798 aaKnown RBP13.99□□□□□ -0.17
HDAC8-217ENST00000478743 ATP4AP20648 1035 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 AFF1P51825 1210 aaKnown RBP13.99□□□□□ -0.17
HDAC8-217ENST00000478743 AK2P54819 239 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 SATB1Q01826 763 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 PLPPR4Q7Z2D5 763 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 LSM14BQ9BX40 385 aaKnown RBP13.99□□□□□ -0.17
HDAC8-217ENST00000478743 CHRDQ9H2X0 955 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 ADAMTS10Q9H324 1103 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 RIOX1Q9H6W3 641 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 PIDD1Q9HB75 910 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 HEBP1Q9NRV9 189 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 SLC9A2Q9UBY0 812 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 NDRG2Q9UN36 371 aaKnown RBP13.99□□□□□ -0.17
HDAC8-217ENST00000478743 FREM2Q5SZK8 3169 aa13.99□□□□□ -0.17
HDAC8-217ENST00000478743 WDR81Q562E7 1941 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 F8W810 466 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 DDHD2O94830 711 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 GLUD1P00367 558 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 ZNF252P-AS1Q0IIN9 211 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 ITGB3BPQ13352 177 aaPredicted RBP13.98□□□□□ -0.17
HDAC8-217ENST00000478743 IQCA1Q86XH1 822 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 CCDC60Q8IWA6 550 aaPredicted RBP13.98□□□□□ -0.17
HDAC8-217ENST00000478743 SMARCC2Q8TAQ2 1214 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 MARCH5Q9NX47 278 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 ZSWIM5Q9P217 1185 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 BPTFQ12830 3046 aa13.98□□□□□ -0.17
HDAC8-217ENST00000478743 TTC41PQ6P2S7 1318 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 TMEM8BA6NDV4 472 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 CCNE2O96020 404 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 ZSCAN20P17040 1043 aaPredicted RBP13.97□□□□□ -0.17
HDAC8-217ENST00000478743 FSHRP23945 695 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 NLRP11P59045 1033 aaKnown RBP13.97□□□□□ -0.17
HDAC8-217ENST00000478743 GAS6Q14393 721 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 UBE2SQ16763 222 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 POTEHQ6S545 545 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 RSPO2Q6UXX9 243 aaPredicted RBP13.97□□□□□ -0.17
HDAC8-217ENST00000478743 CYP26C1Q6V0L0 522 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 PALB2Q86YC2 1186 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 GLYCTKQ8IVS8 523 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 ITFG1Q8TB96 612 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 B3GALT6Q96L58 329 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 RPS6KC1Q96S38 1066 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 SCNM1Q9BWG6 230 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 PLA2G2FQ9BZM2 168 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 ARRDC1-AS1Q9H2J1 176 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 SENP2Q9HC62 589 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 MRPL17Q9NRX2 175 aaKnown RBP13.97□□□□□ -0.17
HDAC8-217ENST00000478743 HELLSQ9NRZ9 838 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 C2orf42Q9NWW7 574 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 CDH7Q9ULB5 785 aa13.97□□□□□ -0.17
HDAC8-217ENST00000478743 SDK1Q7Z5N4 2213 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 IGKV6D-21A0A0A0MT36 114 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 AXIN1O15169 862 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 HBP1O60381 514 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 PCP11498 1178 aaKnown RBP13.96□□□□□ -0.17
HDAC8-217ENST00000478743 NOVA1P51513 510 aaKnown RBP13.96□□□□□ -0.17
HDAC8-217ENST00000478743 ADCY1Q08828 1119 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 NMIQ13287 307 aaPredicted RBP13.96□□□□□ -0.17
HDAC8-217ENST00000478743 SEC23AQ15436 765 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 NOMO2Q5JPE7 1267 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 TCEAL6Q6IPX3 200 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 C19orf48Q6RUI8 117 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 FAM43BQ6ZT52 329 aaPredicted RBP13.96□□□□□ -0.17
HDAC8-217ENST00000478743 GRASPQ7Z6J2 395 aaPredicted RBP13.96□□□□□ -0.17
HDAC8-217ENST00000478743 LRRC71Q8N4P6 559 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 METTL13Q8N6R0 699 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 LINC01465Q8N7H1 131 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 PHKBQ93100 1093 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 TCEAL3Q969E4 200 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 CDHR1Q96JP9 859 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 HERC2P3Q9BVR0 1158 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 PRKD2Q9BZL6 878 aa13.96□□□□□ -0.17
HDAC8-217ENST00000478743 RNF41Q9H4P4 317 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms