RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MFAP3LO75121 409 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 PCDH8O95206 1070 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 JUNP05412 331 aaKnown RBP5.94□□□□□ -1.46
UBR3-209ENST00000477461 KIR2DL3P43628 341 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 INHBCP55103 352 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 NPEPPSP55786 919 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 ADCY1Q08828 1119 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 FSTL1Q12841 308 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 TOB2Q14106 344 aaPredicted RBP5.94□□□□□ -1.46
UBR3-209ENST00000477461 FAM214AQ32MH5 1076 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 GAGE13Q4V321 117 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 CNNM4Q6P4Q7 775 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 LDLRAD3Q86YD5 345 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 CMTM4Q8IZR5 234 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 AMER2Q8N7J2 671 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 UIMC1Q96RL1 719 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 MNTQ99583 582 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 TTPALQ9BTX7 342 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 THG1LQ9NWX6 298 aaKnown RBP5.94□□□□□ -1.46
UBR3-209ENST00000477461 GPRC5BQ9NZH0 403 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 NCAPD3P42695 1498 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 HMGXB3Q12766 1538 aa5.94□□□□□ -1.46
UBR3-209ENST00000477461 A0A0A6YYJ9 748 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 A0A0A6YYK5 440 aaPredicted RBP5.93□□□□□ -1.46
UBR3-209ENST00000477461 LCHNA4D1U4 455 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 HK1P19367 917 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 RABGGTBP53611 331 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 SMN1Q16637 294 aaKnown RBP5.93□□□□□ -1.46
UBR3-209ENST00000477461 ZNF662Q6ZS27 426 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 KANSL1Q7Z3B3 1105 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 CHTF18Q8WVB6 975 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 SOX7Q9BT81 388 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 EPC1Q9H2F5 836 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 ZMAT4Q9H898 229 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 USP18Q9UMW8 372 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 CD2APQ9Y5K6 639 aa5.93□□□□□ -1.46
UBR3-209ENST00000477461 ELL2O00472 640 aaPredicted RBP5.92□□□□□ -1.46
UBR3-209ENST00000477461 OPHN1O60890 802 aa5.92□□□□□ -1.46
UBR3-209ENST00000477461 PTTG1IPP53801 180 aa5.92□□□□□ -1.46
UBR3-209ENST00000477461 INHBEP58166 350 aa5.92□□□□□ -1.46
UBR3-209ENST00000477461 SMAD3P84022 425 aaKnown RBP5.92□□□□□ -1.46
UBR3-209ENST00000477461 KIAA1841Q6NSI8 718 aa5.92□□□□□ -1.46
UBR3-209ENST00000477461 MTFR1LQ9H019 292 aa5.92□□□□□ -1.46
UBR3-209ENST00000477461 C14orf93Q9H972 538 aaKnown RBP5.92□□□□□ -1.46
UBR3-209ENST00000477461 TMEM260Q9NX78 707 aa5.92□□□□□ -1.46
UBR3-209ENST00000477461 MAGEC2Q9UBF1 373 aaPredicted RBP5.92□□□□□ -1.46
UBR3-209ENST00000477461 TOP2AP11388 1531 aaKnown RBP5.92□□□□□ -1.46
UBR3-209ENST00000477461 KLRG2A4D1S0 409 aaPredicted RBP5.91□□□□□ -1.46
UBR3-209ENST00000477461 GAS7O60861 476 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 RAMP2O60895 175 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 CFBP00751 764 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 KRT4P19013 534 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 CD69Q07108 199 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 RABL3Q5HYI8 236 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 C1QL3Q5VWW1 255 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 MRGPRGQ86SM5 289 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 ZNF496Q96IT1 587 aaPredicted RBP5.91□□□□□ -1.46
UBR3-209ENST00000477461 AGAP2Q99490 1192 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 PITHD1Q9GZP4 211 aaPredicted RBP5.91□□□□□ -1.46
UBR3-209ENST00000477461 HAPLN2Q9GZV7 340 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 MS4A5Q9H3V2 200 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 PIF1Q9H611 641 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 MYPNQ86TC9 1320 aa5.91□□□□□ -1.46
UBR3-209ENST00000477461 GOLGA6L6A8MZA4 724 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 MAFGO15525 162 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 RFPL3O75679 317 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 FSBPO95073 299 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 F2P00734 622 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 GAAP10253 952 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 CASRP41180 1078 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 SPIDRQ14159 915 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 PCBP1Q15365 356 aaKnown RBP eCLIP5.9□□□□□ -1.46
UBR3-209ENST00000477461 MFSD5Q6N075 450 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 Q6ZPA2 131 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 RPUSD2Q8IZ73 545 aaKnown RBP5.9□□□□□ -1.46
UBR3-209ENST00000477461 ZNF276Q8N554 614 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 PIK3C3Q8NEB9 887 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 OR5M3Q8NGP4 307 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 ST8SIA2Q92186 375 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 HAS1Q92839 578 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 HIST1H2AHQ96KK5 128 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 GPR101Q96P66 508 aaPredicted RBP5.9□□□□□ -1.46
UBR3-209ENST00000477461 HIST1H2AJQ99878 128 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 SORCS3Q9UPU3 1222 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 DMRT1Q9Y5R6 373 aa5.9□□□□□ -1.46
UBR3-209ENST00000477461 HOXA3O43365 443 aaPredicted RBP5.89□□□□□ -1.47
UBR3-209ENST00000477461 ALDH1A2O94788 518 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 IPO13O94829 963 aaKnown RBP5.89□□□□□ -1.47
UBR3-209ENST00000477461 PEX11BO96011 259 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 GNAT2P19087 354 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 MAN2A1Q16706 1144 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 TKFCQ3LXA3 575 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 LAIR1Q6GTX8 287 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 LRRTM3Q86VH5 581 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 VRK3Q8IV63 474 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 PASD1Q8IV76 773 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 DHX37Q8IY37 1157 aaKnown RBP5.89□□□□□ -1.47
UBR3-209ENST00000477461 ZZZ3Q8IYH5 903 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 ULK2Q8IYT8 1036 aa5.89□□□□□ -1.47
UBR3-209ENST00000477461 MDGA1Q8NFP4 955 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms