RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 IRAK3Q9Y616 596 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 WDFY4Q6ZS81 3184 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 TRIOO75962 3097 aa12.16□□□□□ -0.46
CDRT1-205ENST00000475944 M0R2N6 131 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 ZNF623O75123 536 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 MAFO75444 373 aaPredicted RBP12.15□□□□□ -0.46
CDRT1-205ENST00000475944 STBD1O95210 358 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 CTSAP10619 480 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 PSMC5P62195 406 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 NONOQ15233 471 aaKnown RBP eCLIP12.15□□□□□ -0.46
CDRT1-205ENST00000475944 ATAT1Q5SQI0 421 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 RARS2Q5T160 578 aaKnown RBP12.15□□□□□ -0.46
CDRT1-205ENST00000475944 KIAA1841Q6NSI8 718 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 EXOC8Q8IYI6 725 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 PLCD3Q8N3E9 789 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 TDRD5Q8NAT2 981 aaKnown RBP12.15□□□□□ -0.46
CDRT1-205ENST00000475944 ETNPPLQ8TBG4 499 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 SLC7A3Q8WY07 619 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 LPPQ93052 612 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 PGBD4Q96DM1 585 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 IGSF21Q96ID5 467 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 MBOAT7Q96N66 472 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 NRDE2Q9H7Z3 1164 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 TBC1D13Q9NVG8 400 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 INPP5FQ9Y2H2 1132 aa12.15□□□□□ -0.46
CDRT1-205ENST00000475944 EPB41L2O43491 1005 aaKnown RBP12.14□□□□□ -0.47
CDRT1-205ENST00000475944 ST18O60284 1047 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 OFD1O75665 1012 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 BRD1O95696 1058 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 GALTP07902 379 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 QARSP47897 775 aaKnown RBP12.14□□□□□ -0.47
CDRT1-205ENST00000475944 TOB2Q14106 344 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-205ENST00000475944 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 PLA2G4FQ68DD2 849 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 ANO5Q75V66 913 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 KRT25Q7Z3Z0 450 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 CABP7Q86V35 215 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 PPFIBP1Q86W92 1011 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 TMEM173Q86WV6 379 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-205ENST00000475944 ZDHHC14Q8IZN3 488 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 URGCPQ8TCY9 931 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 AUTS2Q8WXX7 1259 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 ZNF274Q96GC6 653 aaPredicted RBP12.14□□□□□ -0.47
CDRT1-205ENST00000475944 GBP3Q9H0R5 595 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 ZSWIM6Q9HCJ5 1215 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 CYP26B1Q9NR63 512 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 AGPAT5Q9NUQ2 364 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 DBR1Q9UK59 544 aaKnown RBP12.14□□□□□ -0.47
CDRT1-205ENST00000475944 USTQ9Y2C2 406 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 PPME1Q9Y570 386 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 COL4A3BPQ9Y5P4 624 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 CYP46A1Q9Y6A2 500 aa12.14□□□□□ -0.47
CDRT1-205ENST00000475944 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 PDGFBP01127 241 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-205ENST00000475944 WEE2P0C1S8 567 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 GCFC2P16383 781 aaKnown RBP12.13□□□□□ -0.47
CDRT1-205ENST00000475944 EPCAMP16422 314 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 PPP2R5CQ13362 524 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 NPY5RQ15761 445 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 INF2Q27J81 1249 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 LETM2Q2VYF4 491 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 SRGAP1Q7Z6B7 1085 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 KSR1Q8IVT5 923 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 C12orf76Q8N812 135 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-205ENST00000475944 SLC22A17Q8WUG5 538 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 PSPC1Q8WXF1 523 aaKnown RBP12.13□□□□□ -0.47
CDRT1-205ENST00000475944 ATOH1Q92858 354 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-205ENST00000475944 FAM20AQ96MK3 541 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 EMILIN2Q9BXX0 1053 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 SLKQ9H2G2 1235 aaPredicted RBP12.13□□□□□ -0.47
CDRT1-205ENST00000475944 IFT122Q9HBG6 1241 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 FAM86C1Q9NVL1 165 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 KANSL3Q9P2N6 904 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 DNAJB4Q9UDY4 337 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 PCDHB2Q9Y5E7 798 aa12.13□□□□□ -0.47
CDRT1-205ENST00000475944 CNTNAP2Q9UHC6 1331 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 CCDC194A0A1B0GVG4 234 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 MEIS3P2A8K0S8 358 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-205ENST00000475944 SLC37A4O43826 429 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 GAS2O43903 313 aaKnown RBP12.12□□□□□ -0.47
CDRT1-205ENST00000475944 GFRA3O60609 400 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 P4HBP07237 508 aaKnown RBP12.12□□□□□ -0.47
CDRT1-205ENST00000475944 XBP1P17861 261 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 RFC5P40937 340 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 SLC11A1P49279 550 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 PTPN14Q15678 1187 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 PPP4R3AQ6IN85 833 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 AGMOQ6ZNB7 445 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 NEK8Q86SG6 692 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 BCL7CQ8WUZ0 217 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-205ENST00000475944 ACSF2Q96CM8 615 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-205ENST00000475944 CEP170P1Q96L14 293 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 FAM193BQ96PV7 902 aaPredicted RBP12.12□□□□□ -0.47
CDRT1-205ENST00000475944 TMEM175Q9BSA9 504 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 DHX33Q9H6R0 707 aaKnown RBP12.12□□□□□ -0.47
CDRT1-205ENST00000475944 SFXN1Q9H9B4 322 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 RSAD1Q9HA92 442 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 KCNMB3Q9NPA1 279 aa12.12□□□□□ -0.47
CDRT1-205ENST00000475944 VAV3Q9UKW4 847 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms