RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 VAMP7P51809 220 aa19.84■□□□□ 0.77
SYNE4-204ENST00000465425 SPDYE2Q495Y8 402 aa19.84■□□□□ 0.77
SYNE4-204ENST00000465425 RHOT2Q8IXI1 618 aa19.84■□□□□ 0.77
SYNE4-204ENST00000465425 UBLCP1Q8WVY7 318 aaPredicted RBP19.84■□□□□ 0.77
SYNE4-204ENST00000465425 ARHGEF26Q96DR7 871 aa19.84■□□□□ 0.77
SYNE4-204ENST00000465425 ACCSQ96QU6 501 aa19.84■□□□□ 0.77
SYNE4-204ENST00000465425 CARD9Q9H257 536 aa19.84■□□□□ 0.77
SYNE4-204ENST00000465425 TAS2R14Q9NYV8 317 aa19.84■□□□□ 0.77
SYNE4-204ENST00000465425 CNTNAP1P78357 1384 aa19.83■□□□□ 0.77
SYNE4-204ENST00000465425 ICAM1P05362 532 aa19.83■□□□□ 0.76
SYNE4-204ENST00000465425 DLG4P78352 724 aa19.83■□□□□ 0.76
SYNE4-204ENST00000465425 NAA35Q5VZE5 725 aa19.83■□□□□ 0.76
SYNE4-204ENST00000465425 EFCAB13Q8IY85 973 aa19.83■□□□□ 0.76
SYNE4-204ENST00000465425 AGPAT1Q99943 283 aa19.83■□□□□ 0.76
SYNE4-204ENST00000465425 CELF4Q9BZC1 486 aaKnown RBP19.83■□□□□ 0.76
SYNE4-204ENST00000465425 GLIS2Q9BZE0 524 aaPredicted RBP19.83■□□□□ 0.76
SYNE4-204ENST00000465425 NEUROG2Q9H2A3 272 aa19.83■□□□□ 0.76
SYNE4-204ENST00000465425 FAM114A2Q9NRY5 505 aa19.83■□□□□ 0.76
SYNE4-204ENST00000465425 ZHX2Q9Y6X8 837 aa19.83■□□□□ 0.76
SYNE4-204ENST00000465425 MAPTP10636 758 aaKnown RBP19.82■□□□□ 0.76
SYNE4-204ENST00000465425 GUCY1A3Q02108 690 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 PPP2R5EQ16537 467 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 PALB2Q86YC2 1186 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 LMO3Q8TAP4 145 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 VTI1AQ96AJ9 217 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 TMBIM4Q9HC24 238 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 MYH11P35749 1972 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 BHMG1C9JSJ3 638 aaPredicted RBP19.82■□□□□ 0.76
SYNE4-204ENST00000465425 DDX3YO15523 660 aaKnown RBP19.82■□□□□ 0.76
SYNE4-204ENST00000465425 TBC1D12O60347 775 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 CLUL1Q15846 466 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 EMC10Q5UCC4 262 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 CDAN1Q8IWY9 1227 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 PPM1EQ8WY54 764 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 RAB17Q9H0T7 212 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 DEFB129Q9H1M3 183 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 BCS1LQ9Y276 419 aa19.82■□□□□ 0.76
SYNE4-204ENST00000465425 ZBTB12Q9Y330 459 aaPredicted RBP19.82■□□□□ 0.76
SYNE4-204ENST00000465425 TISP43B9A030 160 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 P4HA2O15460 535 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 ASNSP08243 561 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 PLS3P13797 630 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 HPDP32754 393 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-204ENST00000465425 LSP1P33241 339 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 GCLMP48507 274 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 UAP1Q16222 522 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-204ENST00000465425 RUFY4Q6ZNE9 571 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 LARGE2Q8N3Y3 721 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 ARFGAP2Q8N6H7 521 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 XXYLT1Q8NBI6 393 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 CBWD1Q9BRT8 395 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 DPH5Q9H2P9 285 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 CTTNBP2NLQ9P2B4 639 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 DBR1Q9UK59 544 aaKnown RBP19.81■□□□□ 0.76
SYNE4-204ENST00000465425 TULP1O00294 542 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-204ENST00000465425 NFIBO00712 420 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 PTGER2P43116 358 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 QARSP47897 775 aaKnown RBP19.81■□□□□ 0.76
SYNE4-204ENST00000465425 RARRES1P49788 294 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 ITGB3BPQ13352 177 aaPredicted RBP19.81■□□□□ 0.76
SYNE4-204ENST00000465425 DCAF12L1Q5VU92 463 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 MCF2L2Q86YR7 1114 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 OR2W6PQ8NHA6 318 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 SLC20A1Q8WUM9 679 aa19.81■□□□□ 0.76
SYNE4-204ENST00000465425 LOXHD1Q8IVV2 1947 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 USP8P40818 1118 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 PTENP60484 403 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 PPP3CAQ08209 521 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 MTMR1Q13613 665 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 NIPA1Q7RTP0 329 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 ADAT2Q7Z6V5 191 aaKnown RBP19.8■□□□□ 0.76
SYNE4-204ENST00000465425 IL31RAQ8NI17 732 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 SEC14L1Q92503 715 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 TRIM31Q9BZY9 425 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 HSPBP1Q9NZL4 362 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 COL20A1Q9P218 1284 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 COG5Q9UP83 839 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 FAM169AQ9Y6X4 670 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 FTLP02792 175 aaPredicted RBP19.8■□□□□ 0.76
SYNE4-204ENST00000465425 DR1Q01658 176 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 TKFCQ3LXA3 575 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 B4GALNT4Q76KP1 1039 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 ARHGEF19Q8IW93 802 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 CPXCR1Q8N123 301 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 PRPF38AQ8NAV1 312 aaKnown RBP19.8■□□□□ 0.76
SYNE4-204ENST00000465425 ZNF341Q9BYN7 854 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 EPN3Q9H201 632 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 TMEM51Q9NW97 253 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 TCEAL9Q9UHQ7 104 aa19.8■□□□□ 0.76
SYNE4-204ENST00000465425 RPTORQ8N122 1335 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 H0YGN5 161 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 DHX15O43143 795 aaKnown RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 ERLIN2O94905 339 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 YWHABP31946 246 aaKnown RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 FLT3P36888 993 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 MDH1P40925 334 aaKnown RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 MXI1P50539 228 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 ZNF844Q08AG5 666 aa19.79■□□□□ 0.76
SYNE4-204ENST00000465425 ZNF211Q13398 564 aaPredicted RBP19.79■□□□□ 0.76
SYNE4-204ENST00000465425 BIRC3Q13489 604 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms