RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ADRM1Q16186 407 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 GFOD2Q3B7J2 385 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 MINDY4Q4G0A6 757 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 MUM1L1Q5H9M0 696 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 ZNF648Q5T619 568 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 KLHDC10Q6PID8 442 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 FAM180AQ6UWF9 173 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 BTNL9Q6UXG8 535 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 TPH2Q8IWU9 490 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 BCL6BQ8N143 479 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 THEMISQ8N1K5 641 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 GLB1L3Q8NCI6 653 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 GFM2Q969S9 779 aaKnown RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 AIFM3Q96NN9 605 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 SLC2A13Q96QE2 648 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 ADI1Q9BV57 179 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 OSBPL6Q9BZF3 934 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 TMEM168Q9H0V1 697 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 BARX1Q9HBU1 254 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 EPB41L4AQ9HCS5 686 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 NMRK2Q9NPI5 230 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 MAGEL2Q9UJ55 1249 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 TUBD1Q9UJT1 453 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 SMG5Q9UPR3 1016 aaKnown RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 DAPK3O43293 454 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 C1QTNF9P0C862 333 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 SARSP49591 514 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 AFF3P51826 1226 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 ANTXR2P58335 489 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 LINC00310P59036 64 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 DLX2Q07687 328 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 MGAT5Q09328 741 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 KCNA10Q16322 511 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 UAP1L1Q3KQV9 507 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 RRP12Q5JTH9 1297 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 FAM26FQ5R3K3 315 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 IFIT1BQ5T764 474 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 Q6ZUG5 572 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 TMEM151BQ8IW70 566 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 UNC5BQ8IZJ1 945 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 PPM1NQ8N819 430 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 NUDT10Q8NFP7 164 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 PPP1R14CQ8TAE6 165 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 ZNF526Q8TF50 670 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 CLIP3Q96DZ5 547 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 NUDT11Q96G61 164 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 YTHDC1Q96MU7 727 aaKnown RBP4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 FDXACB1Q9BRP7 624 aaPredicted RBP4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 CARD11Q9BXL7 1154 aa4.79□□□□□ -1.64
HMGXB4-205ENST00000464480 A0A0A6YYK5 440 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 FAM171A2A8MVW0 826 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 ERC2O15083 957 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 PRC1O43663 620 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 OFD1O75665 1012 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 KRT1P04264 644 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 RAP1GAPP47736 663 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 TBX4P57082 545 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 USP10Q14694 798 aaKnown RBP4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 ZNF568Q3ZCX4 644 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 C14orf80Q86SX3 495 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 CARFQ8N187 725 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 KLHL36Q8N4N3 616 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 TTC8Q8TAM2 541 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 LPPQ93052 612 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 NKD2Q969F2 451 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 DACT3Q96B18 629 aaPredicted RBP4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 AJUBAQ96IF1 538 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 UIMC1Q96RL1 719 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 SOX7Q9BT81 388 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 KATNBL1Q9H079 304 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 GREM2Q9H772 168 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 FAM184BQ9ULE4 1060 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 DNM3Q9UQ16 869 aa4.78□□□□□ -1.64
HMGXB4-205ENST00000464480 DBX1A6NMT0 343 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 NPIPB6E9PJ23 425 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 FFAR3O14843 346 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 PRPF3O43395 683 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 PRAMEF4O60810 478 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 PHF2O75151 1096 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 LY86O95711 162 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 LTA4HP09960 611 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 HNRNPLP14866 589 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 LPOP22079 712 aaPredicted RBP4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 MCAMP43121 646 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 RRADP55042 308 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 HLTFQ14527 1009 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 PCOLCEQ15113 449 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 ZMAT1Q5H9K5 638 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 TRIM68Q6AZZ1 485 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 MCTP2Q6DN12 878 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 MIGA2Q7L4E1 593 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 RALYLQ86SE5 291 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 TXNDC5Q8NBS9 432 aaKnown RBP4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 ADAMTS17Q8TE56 1095 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 NRG4Q8WWG1 115 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 COA7Q96BR5 231 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 LRGUKQ96M69 825 aa4.77□□□□□ -1.65
HMGXB4-205ENST00000464480 MAP3K14Q99558 947 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms