RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 P4HBP07237 508 aaKnown RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 INPP5BP32019 993 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 CTNNA1P35221 906 aaKnown RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 FLT3P36888 993 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 USP8P40818 1118 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 VAMP7P51809 220 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 CORO7P57737 925 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 PPARDQ03181 441 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 PPATQ06203 517 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 KDM7AQ6ZMT4 941 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 FMNL3Q8IVF7 1028 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 LARGE2Q8N3Y3 721 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 EIF1ADQ8N9N8 165 aaKnown RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 LMO3Q8TAP4 145 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 AGPAT1Q99943 283 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 SLITRK6Q9H5Y7 841 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 UTP11Q9Y3A2 253 aaKnown RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 NR2E1Q9Y466 385 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 DDX3YO15523 660 aaKnown RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 PLA2G6O60733 806 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 ICAM1P05362 532 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 HPDP32754 393 aaPredicted RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 HSD17B4P51659 736 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 PPP3CAQ08209 521 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 CETN1Q12798 172 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 ZNF211Q13398 564 aaPredicted RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 DCAF12L1Q5VU92 463 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 INTS8Q75QN2 995 aaKnown RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 ARHGEF19Q8IW93 802 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 ZSWIM2Q8NEG5 633 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 NEK9Q8TD19 979 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 ACCSQ96QU6 501 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 ZNF341Q9BYN7 854 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 TMEM206Q9H813 350 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 ZNF277Q9NRM2 450 aaPredicted RBP18.34■□□□□ 0.53
ACTB-207ENST00000462494 COG5Q9UP83 839 aa18.34■□□□□ 0.53
ACTB-207ENST00000462494 TMEM150BA6NC51 233 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 ANKRD62A6NC57 917 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 A6NNZ2 444 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 NDUFAB1O14561 156 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 MYZAPP0CAP1 466 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 COPB2P35606 906 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 KIF22Q14807 665 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 UAP1Q16222 522 aaPredicted RBP18.33■□□□□ 0.53
ACTB-207ENST00000462494 TUBB8Q3ZCM7 444 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 TRIM51Q9BSJ1 452 aa18.33■□□□□ 0.53
ACTB-207ENST00000462494 TMEM110-MUSTN1A8MSY1 372 aa18.33■□□□□ 0.52
ACTB-207ENST00000462494 HMGB1P1B2RPK0 211 aaPredicted RBP18.33■□□□□ 0.52
ACTB-207ENST00000462494 ALAS1P13196 640 aa18.33■□□□□ 0.52
ACTB-207ENST00000462494 PTGER2P43116 358 aa18.33■□□□□ 0.52
ACTB-207ENST00000462494 ITGB3BPQ13352 177 aaPredicted RBP18.33■□□□□ 0.52
ACTB-207ENST00000462494 TMBIM4Q9HC24 238 aa18.33■□□□□ 0.52
ACTB-207ENST00000462494 BCCIPQ9P287 314 aaKnown RBP eCLIP18.33■□□□□ 0.52
ACTB-207ENST00000462494 CTTNBP2NLQ9P2B4 639 aa18.33■□□□□ 0.52
ACTB-207ENST00000462494 ZNF536O15090 1300 aa18.32■□□□□ 0.52
ACTB-207ENST00000462494 DHX15O43143 795 aaKnown RBP18.32■□□□□ 0.52
ACTB-207ENST00000462494 MAGEA9P43362 315 aa18.32■□□□□ 0.52
ACTB-207ENST00000462494 RARRES1P49788 294 aa18.32■□□□□ 0.52
ACTB-207ENST00000462494 SF3B2Q13435 895 aaKnown RBP18.32■□□□□ 0.52
ACTB-207ENST00000462494 TKFCQ3LXA3 575 aa18.32■□□□□ 0.52
ACTB-207ENST00000462494 ZNF746Q6NUN9 644 aaPredicted RBP18.32■□□□□ 0.52
ACTB-207ENST00000462494 TMEM51Q9NW97 253 aa18.32■□□□□ 0.52
ACTB-207ENST00000462494 HSPBP1Q9NZL4 362 aa18.32■□□□□ 0.52
ACTB-207ENST00000462494 TMOD4Q9NZQ9 345 aa18.32■□□□□ 0.52
ACTB-207ENST00000462494 CHORDC1Q9UHD1 332 aaPredicted RBP18.32■□□□□ 0.52
ACTB-207ENST00000462494 FTLP02792 175 aaPredicted RBP18.31■□□□□ 0.52
ACTB-207ENST00000462494 PLS3P13797 630 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 RFX1P22670 979 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 LSP1P33241 339 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 QARSP47897 775 aaKnown RBP18.31■□□□□ 0.52
ACTB-207ENST00000462494 MTMR1Q13613 665 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 LRIG3Q6UXM1 1119 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 RPUSD2Q8IZ73 545 aaKnown RBP18.31■□□□□ 0.52
ACTB-207ENST00000462494 GMLQ99445 158 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 AGO4Q9HCK5 861 aaKnown RBP18.31■□□□□ 0.52
ACTB-207ENST00000462494 GPRC5CQ9NQ84 441 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 GOLGA8IPA6NC78 632 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 GOLGA8JA6NMD2 632 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 BHMG1C9JSJ3 638 aaPredicted RBP18.31■□□□□ 0.52
ACTB-207ENST00000462494 SLC16A4O15374 487 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 ASNSP08243 561 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 YWHABP31946 246 aaKnown RBP18.31■□□□□ 0.52
ACTB-207ENST00000462494 DGKZQ13574 1117 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 MYBPC2Q14324 1141 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 HAUS6Q7Z4H7 955 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 XXYLT1Q8NBI6 393 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 CLEC4DQ8WXI8 215 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 KAT5Q92993 513 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 RAVER2Q9HCJ3 691 aaKnown RBP18.31■□□□□ 0.52
ACTB-207ENST00000462494 TTC7AQ9ULT0 858 aaPredicted RBP18.31■□□□□ 0.52
ACTB-207ENST00000462494 FAM169AQ9Y6X4 670 aa18.31■□□□□ 0.52
ACTB-207ENST00000462494 H0YGN5 161 aa18.3■□□□□ 0.52
ACTB-207ENST00000462494 TBC1D12O60347 775 aa18.3■□□□□ 0.52
ACTB-207ENST00000462494 EIF2AK2P19525 551 aaKnown RBP18.3■□□□□ 0.52
ACTB-207ENST00000462494 PEX3P56589 373 aa18.3■□□□□ 0.52
ACTB-207ENST00000462494 ZNF844Q08AG5 666 aa18.3■□□□□ 0.52
ACTB-207ENST00000462494 AADACL2Q6P093 401 aa18.3■□□□□ 0.52
ACTB-207ENST00000462494 CARD9Q9H257 536 aa18.3■□□□□ 0.52
ACTB-207ENST00000462494 FAM114A2Q9NRY5 505 aa18.3■□□□□ 0.52
ACTB-207ENST00000462494 DIS3Q9Y2L1 958 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms