RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 NCBP1Q09161 790 aaKnown RBP20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 PCBP1Q15365 356 aaKnown RBP eCLIP20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 TJAP1Q5JTD0 557 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 CLLU1OSQ5K130 101 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 LRRC43Q8N309 656 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 HELQQ8TDG4 1101 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 ASB2Q96Q27 587 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 BHMT2Q9H2M3 363 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 HCSTQ9UBK5 93 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 ARID2Q68CP9 1835 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 PP2D1A8MPX8 630 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 CSPG5O95196 566 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 LAG3P18627 525 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 CYP11B2P19099 503 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 HOXA11P31270 313 aaPredicted RBP20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 AAK1Q2M2I8 961 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 LONRF3Q496Y0 759 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 ARL6IP4Q66PJ3 421 aaKnown RBP20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 IFNLR1Q8IU57 520 aaPredicted RBP20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 THNSL1Q8IYQ7 743 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 COLGALT1Q8NBJ5 622 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 SPPL3Q8TCT6 385 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 LPPQ93052 612 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 NSUN3Q9H649 340 aaKnown RBP20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 CWH43Q9H720 699 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 FOXD4L1Q9NU39 408 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 DNM3Q9UQ16 869 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 PCDHB2Q9Y5E7 798 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 CHD7Q9P2D1 2997 aa20.95■□□□□ 0.94
SLC6A1-204ENST00000462473 VWA3AA6NCI4 1184 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 LRRIQ4A6NIV6 560 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 ZNF623O75123 536 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 AXLP30530 894 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 TFF2Q03403 129 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 MBTD1Q05BQ5 628 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 ZRSR1Q15695 479 aaKnown RBP20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 CSPP1Q1MSJ5 1256 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 TCEAL5Q5H9L2 206 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 LRRC55Q6ZSA7 311 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 POF1BQ8WVV4 589 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 SYMPKQ92797 1274 aaKnown RBP20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 PGBD4Q96DM1 585 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 COL25A1Q9BXS0 654 aaPredicted RBP20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 MRPL9Q9BYD2 267 aaKnown RBP20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 NFKBIZQ9BYH8 718 aa20.94■□□□□ 0.94
SLC6A1-204ENST00000462473 FNDC1Q4ZHG4 1894 aaPredicted RBP20.93■□□□□ 0.94
SLC6A1-204ENST00000462473 E9PMD0 336 aa20.93■□□□□ 0.94
SLC6A1-204ENST00000462473 TSPAN1O60635 241 aa20.93■□□□□ 0.94
SLC6A1-204ENST00000462473 SYT1P21579 422 aa20.93■□□□□ 0.94
SLC6A1-204ENST00000462473 NOTUMQ6P988 496 aa20.93■□□□□ 0.94
SLC6A1-204ENST00000462473 FGF18O76093 207 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 EYA4O95677 639 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 BMP15O95972 392 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 CAMK1Q14012 370 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 GLB1LQ6UWU2 654 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 ZBTB8OSQ8IWT0 167 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 RSPH1Q8WYR4 309 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 SNX21Q969T3 373 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 CPB2Q96IY4 423 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 ZNF558Q96NG5 402 aa20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 MMTAG2Q9BU76 263 aaKnown RBP20.92■□□□□ 0.94
SLC6A1-204ENST00000462473 MEIS3P2A8K0S8 358 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 DNAJB1P25685 340 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 UBE3AQ05086 875 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 SF3A1Q15459 793 aaKnown RBP20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 UBXN11Q5T124 520 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 KCNT2Q6UVM3 1135 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 MRPL10Q7Z7H8 261 aaKnown RBP20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 CNNM3Q8NE01 707 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 CCDC51Q96ER9 411 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 CDK5RAP3Q96JB5 506 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 UBE2ZQ9H832 354 aaPredicted RBP20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 POLD4Q9HCU8 107 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 INPP5FQ9Y2H2 1132 aa20.91■□□□□ 0.94
SLC6A1-204ENST00000462473 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 OFD1O75665 1012 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 ARF4P18085 180 aaPredicted RBP20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 PPP2R5AQ15172 486 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 AMHR2Q16671 573 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 NOMO2Q5JPE7 1267 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 EP400NLQ6ZTU2 488 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 HSCBQ8IWL3 235 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 MICAL1Q8TDZ2 1067 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 BSNDQ8WZ55 320 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 KIFAP3Q92845 792 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 PPP2R3CQ969Q6 453 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 IFT74Q96LB3 600 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 EIF2AQ9BY44 585 aaKnown RBP20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 NT5C3AQ9H0P0 336 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 CSRNP2Q9H175 543 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 C2orf40Q9H1Z8 148 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 RSAD1Q9HA92 442 aa20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 PRMT7Q9NVM4 692 aaPredicted RBP20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 PUF60Q9UHX1 559 aaKnown RBP20.9■□□□□ 0.94
SLC6A1-204ENST00000462473 B4GALT5O43286 388 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 NCK2O43639 380 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 NCLP19338 710 aaKnown RBP20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 IRS1P35568 1242 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 PPM1AP35813 382 aa20.89■□□□□ 0.93
SLC6A1-204ENST00000462473 PBX3P40426 434 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms