RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 LRIG3Q6UXM1 1119 aa8.25□□□□□ -1.09
HDAC9-218ENST00000456174 APTXQ7Z2E3 356 aaKnown RBP8.25□□□□□ -1.09
HDAC9-218ENST00000456174 CCDC197Q8NCU1 140 aa8.25□□□□□ -1.09
HDAC9-218ENST00000456174 SMC1BQ8NDV3 1235 aa8.25□□□□□ -1.09
HDAC9-218ENST00000456174 GSDMAQ96QA5 445 aa8.25□□□□□ -1.09
HDAC9-218ENST00000456174 ZNF341Q9BYN7 854 aa8.25□□□□□ -1.09
HDAC9-218ENST00000456174 FHDC1Q9C0D6 1143 aaPredicted RBP8.25□□□□□ -1.09
HDAC9-218ENST00000456174 VCXQ9H320 206 aa8.25□□□□□ -1.09
HDAC9-218ENST00000456174 DMGDHQ9UI17 866 aaKnown RBP8.25□□□□□ -1.09
HDAC9-218ENST00000456174 DACH1Q9UI36 760 aa8.25□□□□□ -1.09
HDAC9-218ENST00000456174 ITGB1BP2Q9UKP3 347 aa8.25□□□□□ -1.09
HDAC9-218ENST00000456174 CTNND1O60716 968 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 UPP2O95045 317 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 MYBL1P10243 752 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 ACADSP16219 412 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 SESN3P58005 492 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 SULT2A1Q06520 285 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 C2orf54Q08AI8 447 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 AP3B2Q13367 1082 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 NAALADL2Q58DX5 795 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 ANGEL2Q5VTE6 544 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 IRGCQ6NXR0 463 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 CYP26C1Q6V0L0 522 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 TBC1D1Q86TI0 1168 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 CABP7Q86V35 215 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 GPC2Q8N158 579 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 PPP2R3CQ969Q6 453 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 DHRS1Q96LJ7 313 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 CCDC43Q96MW1 224 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 MPHOSPH6Q99547 160 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 ANO3Q9BYT9 981 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 BLZF1Q9H2G9 400 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 POLD4Q9HCU8 107 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 GPRC5DQ9NZD1 345 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 ADAM22Q9P0K1 906 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 STIM2Q9P246 746 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 DDX25Q9UHL0 483 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 NFE2L3Q9Y4A8 694 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 PLA2G6O60733 806 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 TAL1P17542 331 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 FXR2P51116 673 aaKnown RBP eCLIP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 PSMD7P51665 324 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 USP11P51784 963 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 SH3BGRP55822 239 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 CLPPQ16740 277 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 TMEM266Q2M3C6 531 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 FOXB2Q5VYV0 432 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 TMEM154Q6P9G4 183 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 FAM160B2Q86V87 743 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 APOBEC3FQ8IUX4 373 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 ARHGAP18Q8N392 663 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 SAMD3Q8N6K7 520 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 ARL10Q8N8L6 244 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 ERMNQ8TAM6 284 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 CAGE1Q8TC20 777 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 TRPM4Q8TD43 1214 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 RAPGEF5Q92565 580 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 RPS6KC1Q96S38 1066 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 PLIN2Q99541 437 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 NAP1L4Q99733 375 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 OXCT2Q9BYC2 517 aaPredicted RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 NACA2Q9H009 215 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 GINM1Q9NU53 330 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 LRWD1Q9UFC0 647 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 FEM1BQ9UK73 627 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 PAIP2BQ9ULR5 123 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 REXO2Q9Y3B8 237 aaKnown RBP8.24□□□□□ -1.09
HDAC9-218ENST00000456174 UTRNP46939 3433 aa8.24□□□□□ -1.09
HDAC9-218ENST00000456174 MARCH6O60337 910 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 SRGAP2O75044 1071 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 BCRP11274 1271 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 CASP14P31944 242 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 NCALDP61601 193 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 BIRC3Q13489 604 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 DCAF15Q66K64 600 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 CCDC174Q6PII3 467 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 NCCRP1Q6ZVX7 275 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-218ENST00000456174 EXOC3L1Q86VI1 746 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 LRRC43Q8N309 656 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 SNRNP27Q8WVK2 155 aaKnown RBP8.23□□□□□ -1.09
HDAC9-218ENST00000456174 PTPRN2Q92932 1015 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 CENPTQ96BT3 561 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 CAPZA3Q96KX2 299 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 P2RX7Q99572 595 aaKnown RBP8.23□□□□□ -1.09
HDAC9-218ENST00000456174 LRRC1Q9BTT6 524 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 TIPINQ9BVW5 301 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 RAB34Q9BZG1 259 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 FBXO28Q9NVF7 368 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 TBC1D7Q9P0N9 293 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 TMED5Q9Y3A6 229 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 IPO5O00410 1097 aaKnown RBP8.23□□□□□ -1.09
HDAC9-218ENST00000456174 ASAP2O43150 1006 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 GFPT2O94808 682 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 FOSP01100 380 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-218ENST00000456174 GYPCP04921 128 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 PLCG1P19174 1290 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 HOXA13P31271 388 aaPredicted RBP8.23□□□□□ -1.09
HDAC9-218ENST00000456174 RFC5P40937 340 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 EPS15P42566 896 aa8.23□□□□□ -1.09
HDAC9-218ENST00000456174 ZNF131P52739 623 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms