RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 RPAP3Q9H6T3 665 aaPredicted RBP12.06□□□□□ -0.48
DDR1-239ENST00000452441 EFCC1Q9HA90 598 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 TTC7AQ9ULT0 858 aaPredicted RBP12.06□□□□□ -0.48
DDR1-239ENST00000452441 STK38LQ9Y2H1 464 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 IRS2Q9Y4H2 1338 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 TLR2O60603 784 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
DDR1-239ENST00000452441 KIF4AO95239 1232 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 CCDC172P0C7W6 258 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 CD19P15391 556 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 ERFP50548 548 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 EMBQ6PCB8 327 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 RPUSD2Q8IZ73 545 aaKnown RBP12.06□□□□□ -0.48
DDR1-239ENST00000452441 SLC20A1Q8WUM9 679 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 IFT74Q96LB3 600 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 VCPKMTQ9H867 229 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 RNF146Q9NTX7 359 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 HERC5Q9UII4 1024 aaKnown RBP12.06□□□□□ -0.48
DDR1-239ENST00000452441 NAGPAQ9UK23 515 aa12.06□□□□□ -0.48
DDR1-239ENST00000452441 A0A087WUV0 522 aaPredicted RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 PHF20L1A8MW92 1017 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 FOXN3O00409 490 aaPredicted RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 EIF3HO15372 352 aaKnown RBP eCLIP12.05□□□□□ -0.485e-6■■■□□ 14.9
DDR1-239ENST00000452441 SRGAP2CP0DJJ0 459 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 GMPSP49915 693 aaPredicted RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 CDK17Q00537 523 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 BAATQ14032 418 aaPredicted RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 FAM133BQ5BKY9 247 aaKnown RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 TTMPQ5BVD1 217 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 NBPF12Q5TAG4 269 aaPredicted RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 FAM151AQ8WW52 585 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 DNAJC19Q96DA6 116 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 CBWD1Q9BRT8 395 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 NUCKS1Q9H1E3 243 aaKnown RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 TAS2R14Q9NYV8 317 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 BAIAP2L1Q9UHR4 511 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 CSADQ9Y600 493 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 GRID2IPA4D2P6 1211 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 RGS16O15492 202 aaPredicted RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 RINT1Q6NUQ1 792 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 LRRC55Q6ZSA7 311 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 PRPF38AQ8NAV1 312 aaKnown RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 LRRC45Q96CN5 670 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 ICE2Q659A1 982 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 DENND2CQ68D51 928 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 SCARA5Q6ZMJ2 495 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 DEFB129Q9H1M3 183 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 METTL14Q9HCE5 456 aaKnown RBP12.05□□□□□ -0.48
DDR1-239ENST00000452441 PRM3Q9NNZ6 103 aa12.05□□□□□ -0.48
DDR1-239ENST00000452441 ASTN2O75129 1339 aaPredicted RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 ENTPD3O75355 529 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 MXI1P50539 228 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 GABPAQ06546 454 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 ACTN3Q08043 901 aaPredicted RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 MCF2L2Q86YR7 1114 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 ACSF2Q96CM8 615 aaPredicted RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 ATG4CQ96DT6 458 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 TAAR1Q96RJ0 339 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 TOPORSQ9NS56 1045 aaPredicted RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 COL5A3P25940 1745 aaPredicted RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 POLGP54098 1239 aaPredicted RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 SWSAP1Q6NVH7 229 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 MYOZ2Q9NPC6 264 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 KMT5AQ9NQR1 393 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 DBR1Q9UK59 544 aaKnown RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 COL22A1Q8NFW1 1626 aaPredicted RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 YDJCA8MPS7 323 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 GOLGA8SH3BPF8 625 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 GOLGA8MH3BSY2 632 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 MYO1FO00160 1098 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 MEIS2O14770 477 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 RPSAP08865 295 aaKnown RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 CLTAP09496 248 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 ADCY8P40145 1251 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 LIG4P49917 911 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 DLG4P78352 724 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 JAG1P78504 1218 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 DR1Q01658 176 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 ARSHQ5FYA8 562 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 STYK1Q6J9G0 422 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 UBL4BQ8N7F7 174 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 BAP1Q92560 729 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 IQCDQ96DY2 449 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 FMO2Q99518 471 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 FAM213AQ9BRX8 229 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 TYW1Q9NV66 732 aaKnown RBP12.04□□□□□ -0.48
DDR1-239ENST00000452441 GABBR1Q9UBS5 961 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 TRPC6Q9Y210 931 aa12.04□□□□□ -0.48
DDR1-239ENST00000452441 POC1B-GALNT4F8VUJ3 575 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 PIK3R2O00459 728 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 RPA1P27694 616 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 RPS6P62753 249 aaKnown RBP12.03□□□□□ -0.48
DDR1-239ENST00000452441 STRN3Q13033 797 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 DMP1Q13316 513 aaPredicted RBP12.03□□□□□ -0.48
DDR1-239ENST00000452441 FAM160B2Q86V87 743 aa12.03□□□□□ -0.48
DDR1-239ENST00000452441 GGA3Q9NZ52 723 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms