RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 MBIPQ9NS73 344 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 COPG2Q9UBF2 871 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 DTNAQ9Y4J8 743 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 KDM3AQ9Y4C1 1321 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 IQGAP3Q86VI3 1631 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ESYT2A0FGR8 921 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CCDC189A1A4V9 331 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 LRRIQ4A6NIV6 560 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 LGALS16A8MUM7 142 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CENPBD1B2RD01 187 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 H3BRJ5 948 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 H7C1W4 665 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 RANBP6O60518 1105 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 H2AFYO75367 372 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 PDE9AO76083 593 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SYF2O95926 243 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 ZBED1O96006 694 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MX2P20592 715 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 KRT20P35900 424 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CDK7P50613 346 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 NDUFA8P51970 172 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 RAPGEF1Q13905 1077 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MLECQ14165 292 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ME3Q16798 604 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PUS10Q3MIT2 529 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 BBS9Q3SYG4 887 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 HSP90AA4PQ58FG1 418 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CDCA2Q69YH5 1023 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 GALNT17Q6IS24 598 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PACS1Q6VY07 963 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MPRIPQ6WCQ1 1025 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SV2BQ7L1I2 683 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CYFIP1Q7L576 1253 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 AKAP14Q86UN6 197 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ZNF589Q86UQ0 364 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 TRIM59Q8IWR1 403 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SMYD1Q8NB12 490 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PYROXD1Q8WU10 500 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 NAT14Q8WUY8 206 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TATDN2Q93075 761 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 ACSBG1Q96GR2 724 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 CYTH2Q99418 400 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PRPF18Q99633 342 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 BEGAINQ9BUH8 593 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 SLC26A6Q9BXS9 759 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 UBXN6Q9BZV1 441 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 LSG1Q9H089 658 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 ASCC2Q9H1I8 757 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 VPS37BQ9H9H4 285 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 IFT122Q9HBG6 1241 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PARVGQ9HBI0 331 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TMEM165Q9HC07 324 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 QPCTLQ9NXS2 382 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MAP3K20Q9NYL2 800 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 FAM153AQ9UHL3 310 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 MAN1B1Q9UKM7 699 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 TRPC5Q9UL62 973 aaPredicted RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 NSFL1CQ9UNZ2 370 aaKnown RBP2.35□□□□□ -2.03
USP53-202ENST00000450251 UNC13BO14795 1591 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PTPRKQ15262 1439 aa2.35□□□□□ -2.03
USP53-202ENST00000450251 PFASO15067 1338 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SOS2Q07890 1332 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 STK36Q9NRP7 1315 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PNMA8CA0A1B0GUJ8 204 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 MAGEB16A2A368 324 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 NBPF26B4DH59 902 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ANKRD65E5RJM6 399 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 IRF6O14896 467 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ANGPT2O15123 496 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 RNMTO43148 476 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 ZNF24P17028 368 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SP100P23497 879 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 RFC5P40937 340 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 CARSP49589 748 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 PPP2R5CQ13362 524 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 INPP5AQ14642 412 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TCP11X2Q5H9J9 407 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 TYW1BQ6NUM6 668 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PI16Q6UXB8 463 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 LPCAT2Q7L5N7 544 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 FMR1NBQ8N0W7 255 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 MB21D1Q8N884 522 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ARL10Q8N8L6 244 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 RAPGEF5Q92565 580 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 DLG3Q92796 817 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 NLRP4Q96MN2 994 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 WDR24Q96S15 920 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PRMT1Q99873 361 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 TEX13BQ9BXU2 312 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 RTFDC1Q9BY42 306 aaPredicted RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 MRPL1Q9BYD6 325 aaKnown RBP2.34□□□□□ -2.03
USP53-202ENST00000450251 ANKHQ9HCJ1 492 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 CAPN11Q9UMQ6 739 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 SORCS3Q9UPU3 1222 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 ZDHHC9Q9Y397 364 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 A2MP01023 1474 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 NRXN1Q9ULB1 1477 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 IQGAP1P46940 1657 aa2.34□□□□□ -2.03
USP53-202ENST00000450251 PALM3A6NDB9 673 aaPredicted RBP2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms