RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 NFKBIZQ9BYH8 718 aa21.54■■□□□ 1.04
SEMA3B-206ENST00000439487 C1orf112Q9NSG2 853 aa21.54■■□□□ 1.04
SEMA3B-206ENST00000439487 STK17AQ9UEE5 414 aa21.54■■□□□ 1.04
SEMA3B-206ENST00000439487 PIN4Q9Y237 131 aaKnown RBP21.54■■□□□ 1.04
SEMA3B-206ENST00000439487 CHD9Q3L8U1 2897 aa21.54■■□□□ 1.04
SEMA3B-206ENST00000439487 CA3P07451 260 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 STAT6P42226 847 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 SARSP49591 514 aaKnown RBP21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 PEX3P56589 373 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 PPP2R5AQ15172 486 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 CDCA2Q69YH5 1023 aaPredicted RBP21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 SLC24A5Q71RS6 500 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 DEPTORQ8TB45 409 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 DRC1Q96MC2 740 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 KIFC3Q9BVG8 833 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 CHST12Q9NRB3 414 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 AGPAT5Q9NUQ2 364 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 KCND2Q9NZV8 630 aa21.53■■□□□ 1.04
SEMA3B-206ENST00000439487 A0A0C4DFX4 3053 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 LCHNA4D1U4 455 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 ERLIN2O94905 339 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 FAM189BP81408 668 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 HTRA4P83105 476 aaPredicted RBP21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 GPR153Q6NV75 609 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 Q7L0L9 218 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 NPAS4Q8IUM7 802 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 ZBTB8OSQ8IWT0 167 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 CRIPAKQ8N1N5 446 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 SCAND2PQ9GZW5 306 aaPredicted RBP21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 TTYH1Q9H313 450 aaPredicted RBP21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 GDPD2Q9HCC8 539 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 LRFN2Q9ULH4 789 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 INSL6Q9Y581 213 aa21.52■■□□□ 1.04
SEMA3B-206ENST00000439487 ADGRA3Q8IWK6 1321 aa21.52■■□□□ 1.03
SEMA3B-206ENST00000439487 KIAA1671Q9BY89 1806 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 CCDC169A6NNP5 214 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 TSPAN1O60635 241 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 ARHGEF15O94989 841 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 KRT18P05783 430 aaKnown RBP21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 STAG3L1P0CL83 205 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 LIG1P18858 919 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 HOXA11P31270 313 aaPredicted RBP21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 AMHR2Q16671 573 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 ZNF697Q5TEC3 545 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 RESP18Q5W5W9 173 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 TWF2Q6IBS0 349 aaKnown RBP21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 SV2BQ7L1I2 683 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 CPB2Q96IY4 423 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 FAM161BQ96MY7 647 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 YME1L1Q96TA2 773 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 REEP2Q9BRK0 252 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 C2orf40Q9H1Z8 148 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 SLC28A3Q9HAS3 691 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 DACT1Q9NYF0 836 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 FAM13BQ9NYF5 915 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 CIZ1Q9ULV3 898 aaPredicted RBP21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 PCDHB7Q9Y5E2 793 aa21.51■■□□□ 1.03
SEMA3B-206ENST00000439487 COL4A6Q14031 1691 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 B4GALT5O43286 388 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 NPTX2P47972 431 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 DMP1Q13316 513 aaPredicted RBP21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 GIT2Q14161 759 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 TPRNQ4KMQ1 711 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 PPP2R2DQ66LE6 453 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 ECHDC2Q86YB7 292 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 DHX58Q96C10 678 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 SEMA6BQ9H3T3 888 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 FZD8Q9H461 694 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 TSHZ2Q9NRE2 1034 aa21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 RBM19Q9Y4C8 960 aaKnown RBP21.5■■□□□ 1.03
SEMA3B-206ENST00000439487 CHD7Q9P2D1 2997 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 TRIP11Q15643 1979 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 DGKIO75912 1065 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 PLS3P13797 630 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 GATMP50440 423 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 PCBP1Q15365 356 aaKnown RBP eCLIP21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 E2F4Q16254 413 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 ADALQ6DHV7 355 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 DYMQ7RTS9 669 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 DEFB123Q8N688 67 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 ZNF576Q9H609 170 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 C17orf75Q9HAS0 396 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 KMT5AQ9NQR1 393 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 PRMT7Q9NVM4 692 aaPredicted RBP21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 TMEM161AQ9NX61 479 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 ODF2LQ9ULJ1 636 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 USP20Q9Y2K6 914 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 RALGAPA2Q2PPJ7 1873 aa21.49■■□□□ 1.03
SEMA3B-206ENST00000439487 TMEM265A0A087WTH1 108 aa21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 A0A0U1RQF3 1178 aa21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 MYMKA6NI61 221 aa21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 SLC16A4O15374 487 aa21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 POLR2DO15514 142 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 FAM13AO94988 1023 aa21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 PRKCBP05771 671 aa21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 ARF4P18085 180 aaPredicted RBP21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 AXLP30530 894 aa21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 TAP1Q03518 808 aa21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 NCBP1Q09161 790 aaKnown RBP21.48■■□□□ 1.03
SEMA3B-206ENST00000439487 UBXN11Q5T124 520 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms