RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 KIF20AO95235 890 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 TIMP1P01033 207 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 CHRNA1P02708 482 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 IQCF3P0C7M6 154 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 DARSP14868 501 aaKnown RBP20.28■□□□□ 0.84
HDAC6-208ENST00000438518 RAG1P15918 1043 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 SFPQP23246 707 aaKnown RBP eCLIP20.28■□□□□ 0.84
HDAC6-208ENST00000438518 PPP1R2P41236 205 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 TMEM62Q0P6H9 643 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 CAMK4Q16566 473 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 KSR1Q8IVT5 923 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 FIZ1Q96SL8 496 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 OSMRQ99650 979 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 PRDM5Q9NQX1 630 aaPredicted RBP20.28■□□□□ 0.84
HDAC6-208ENST00000438518 PCDHB13Q9Y5F0 798 aa20.28■□□□□ 0.84
HDAC6-208ENST00000438518 LTBP2Q14767 1821 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 K7ENM7 598 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 EIF3DO15371 548 aaKnown RBP eCLIP20.27■□□□□ 0.84
HDAC6-208ENST00000438518 CTSHP09668 335 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 GTF2BQ00403 316 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 MAPK6Q16659 721 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 FAM187BQ17R55 369 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 FBXO47Q5MNV8 452 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 TRAF7Q6Q0C0 670 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 TSHZ1Q6ZSZ6 1077 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 ZNF720Q7Z2F6 126 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 HAUS6Q7Z4H7 955 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 TMEM161BQ8NDZ6 487 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 PRMT7Q9NVM4 692 aaPredicted RBP20.27■□□□□ 0.84
HDAC6-208ENST00000438518 GINS2Q9Y248 185 aa20.27■□□□□ 0.84
HDAC6-208ENST00000438518 K7ERI5 159 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 GPR182O15218 404 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 SLC16A4O15374 487 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 PFKMP08237 780 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 NCBP1Q09161 790 aaKnown RBP20.26■□□□□ 0.83
HDAC6-208ENST00000438518 STRN3Q13033 797 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 COBLL1Q53SF7 1204 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 ZNF658Q5TYW1 1059 aaPredicted RBP20.26■□□□□ 0.83
HDAC6-208ENST00000438518 PPP4R3CPQ6ZMV5 832 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 C7orf61Q8IZ16 206 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 TMEM199Q8N511 208 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 PPP1R12CQ9BZL4 782 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 POLD4Q9HCU8 107 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 TMEM63CQ9P1W3 806 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 NR2E3Q9Y5X4 410 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 ADGRA3Q8IWK6 1321 aa20.26■□□□□ 0.83
HDAC6-208ENST00000438518 MKI67P46013 3256 aaKnown RBP20.25■□□□□ 0.83
HDAC6-208ENST00000438518 DENND3A2RUS2 1198 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 INO80B-WBP1J3KQ70 363 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 RPS6KA5O75582 802 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 PPP1R37O75864 691 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 GCNT3O95395 438 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 AXLP30530 894 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 RGS19P49795 217 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 MBTD1Q05BQ5 628 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 MFSD5Q6N075 450 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 CAVIN1Q6NZI2 390 aaKnown RBP20.25■□□□□ 0.83
HDAC6-208ENST00000438518 DPF3Q92784 378 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 APBB2Q92870 758 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 STRA6Q9BX79 667 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 CCDC113Q9H0I3 377 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 WNT8AQ9H1J5 351 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 FZD8Q9H461 694 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 TMEM206Q9H813 350 aa20.25■□□□□ 0.83
HDAC6-208ENST00000438518 TRIM43BA6NCK2 446 aa20.24■□□□□ 0.83
HDAC6-208ENST00000438518 ERLIN2O94905 339 aa20.24■□□□□ 0.83
HDAC6-208ENST00000438518 BMT2Q1RMZ1 405 aa20.24■□□□□ 0.83
HDAC6-208ENST00000438518 MAP4K3Q8IVH8 894 aa20.24■□□□□ 0.83
HDAC6-208ENST00000438518 TRIM43Q96BQ3 446 aaPredicted RBP20.24■□□□□ 0.83
HDAC6-208ENST00000438518 PPP1R16BQ96T49 567 aa20.24■□□□□ 0.83
HDAC6-208ENST00000438518 MAN1B1Q9UKM7 699 aa20.24■□□□□ 0.83
HDAC6-208ENST00000438518 EXOC7Q9UPT5 735 aa20.24■□□□□ 0.83
HDAC6-208ENST00000438518 ACKR2O00590 384 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 CXCL10P02778 98 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 PRKCBP05771 671 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 NMT1P30419 496 aaKnown RBP20.23■□□□□ 0.83
HDAC6-208ENST00000438518 CYP2C18P33260 490 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 STK4Q13043 487 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 PAK2Q13177 524 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 LPIN1Q14693 890 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 L1TD1Q5T7N2 865 aaKnown RBP20.23■□□□□ 0.83
HDAC6-208ENST00000438518 ZPBP2Q6X784 338 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 EPM2AIP1Q7L775 607 aaPredicted RBP20.23■□□□□ 0.83
HDAC6-208ENST00000438518 RPUSD2Q8IZ73 545 aaKnown RBP20.23■□□□□ 0.83
HDAC6-208ENST00000438518 ZNF507Q8TCN5 953 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 TMEM40Q8WWA1 233 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 KIFC3Q9BVG8 833 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 FTHL17Q9BXU8 183 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 MRPL4Q9BYD3 311 aaKnown RBP20.23■□□□□ 0.83
HDAC6-208ENST00000438518 CDHR5Q9HBB8 845 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 TBX20Q9UMR3 447 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 UMODL1Q5DID0 1318 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 CNTNAP2Q9UHC6 1331 aa20.23■□□□□ 0.83
HDAC6-208ENST00000438518 GHRP10912 638 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 SNRPFP62306 86 aaKnown RBP20.22■□□□□ 0.83
HDAC6-208ENST00000438518 STIM1Q13586 685 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 MORC3Q14149 939 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 CATSPER4Q7RTX7 472 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 FAM228AQ86W67 206 aa20.22■□□□□ 0.83
HDAC6-208ENST00000438518 GUF1Q8N442 669 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms