RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MAGEC2Q9UBF1 373 aaPredicted RBP20.04■□□□□ 0.8
HMGN1-206ENST00000431390 LIMA1Q9UHB6 759 aaKnown RBP20.04■□□□□ 0.8
HMGN1-206ENST00000431390 RRN3P2A6NIE6 340 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 KCNJ18B7U540 433 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 HAS3O00219 553 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 MYL3P08590 195 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 C6orf222P0C671 652 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-206ENST00000431390 CCND3P30281 292 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-206ENST00000431390 CDC25BP30305 580 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 UBASH3AP57075 661 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 BEX3Q00994 111 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 KCNA1Q09470 495 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 PPFIA1Q13136 1202 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 KCNJ12Q14500 433 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 MXD4Q14582 209 aaPredicted RBP20.03■□□□□ 0.8
HMGN1-206ENST00000431390 GOLGA5Q8TBA6 731 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 ASAP3Q8TDY4 903 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 TRAPPC12Q8WVT3 735 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 PSPC1Q8WXF1 523 aaKnown RBP20.03■□□□□ 0.8
HMGN1-206ENST00000431390 GBP3Q9H0R5 595 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 EVPLQ92817 2033 aa20.03■□□□□ 0.8
HMGN1-206ENST00000431390 LRRC10BA6NIK2 292 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 TGFB1I1O43294 461 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 ZEB2O60315 1214 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 DNM2P50570 870 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 SNRPFP62306 86 aaKnown RBP20.02■□□□□ 0.8
HMGN1-206ENST00000431390 PURAQ00577 322 aaKnown RBP20.02■□□□□ 0.8
HMGN1-206ENST00000431390 MKRN4PQ13434 485 aaPredicted RBP20.02■□□□□ 0.8
HMGN1-206ENST00000431390 MFSD10Q14728 455 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 GRIK4Q16099 956 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 KIAA0753Q2KHM9 967 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 HS2ST1Q7LGA3 356 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 APTXQ7Z2E3 356 aaKnown RBP20.02■□□□□ 0.8
HMGN1-206ENST00000431390 DEFB123Q8N688 67 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 XPO4Q9C0E2 1151 aaKnown RBP20.02■□□□□ 0.8
HMGN1-206ENST00000431390 SUGCTQ9HAC7 445 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 CGNQ9P2M7 1197 aaKnown RBP20.02■□□□□ 0.8
HMGN1-206ENST00000431390 EXOC7Q9UPT5 735 aa20.02■□□□□ 0.8
HMGN1-206ENST00000431390 NRCAMQ92823 1304 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 DENND3A2RUS2 1198 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 ADAMTS4O75173 837 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 TPM3P06753 285 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 RPL13P26373 211 aaKnown RBP20.01■□□□□ 0.79
HMGN1-206ENST00000431390 KLRC1P26715 233 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 PSEN2P49810 448 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 IGBP1P78318 339 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 IRX5P78411 483 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-206ENST00000431390 EFCAB12Q6NXP0 572 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 FILIP1Q7Z7B0 1213 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 MAP4K3Q8IVH8 894 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 KSR1Q8IVT5 923 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 SYCP3Q8IZU3 236 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 LINC01465Q8N7H1 131 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 TMEM174Q8WUU8 243 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 CNOT6LQ96LI5 555 aaKnown RBP20.01■□□□□ 0.79
HMGN1-206ENST00000431390 XPNPEP3Q9NQH7 507 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 TBX20Q9UMR3 447 aa20.01■□□□□ 0.79
HMGN1-206ENST00000431390 ADGRA3Q8IWK6 1321 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 MYADML2A6NDP7 307 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 CETN3O15182 167 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 ASAP2O43150 1006 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 GNA14O95837 355 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 CST5P28325 142 aaPredicted RBP20■□□□□ 0.79
HMGN1-206ENST00000431390 DRP2Q13474 957 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 KRT31Q15323 416 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 LRIT3Q3SXY7 679 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 FILIP1LQ4L180 1135 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 GNASQ5JWF2 1037 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 GPR153Q6NV75 609 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 MTHFD1LQ6UB35 978 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 TDHQ8IZJ6 230 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 LRRC71Q8N4P6 559 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 DEPTORQ8TB45 409 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 PRPF31Q8WWY3 499 aaKnown RBP20■□□□□ 0.79
HMGN1-206ENST00000431390 KIFC3Q9BVG8 833 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 SUCLA2Q9P2R7 463 aaPredicted RBP20■□□□□ 0.79
HMGN1-206ENST00000431390 DDX20Q9UHI6 824 aaKnown RBP20■□□□□ 0.79
HMGN1-206ENST00000431390 PHLPP2Q6ZVD8 1323 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 A0A1B0GTH6 734 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 MSCO60682 206 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 PGK1P00558 417 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 NR3C1P04150 777 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 SMIM10L2AP0DMW4 78 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 SMIM10L2BP0DMW5 78 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 NR2F2P24468 414 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 TMOD1P28289 359 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 ADAM9Q13443 819 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 CAPSQ13938 189 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 MYBPC2Q14324 1141 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 NAP1L5Q96NT1 182 aaPredicted RBP20■□□□□ 0.79
HMGN1-206ENST00000431390 TMEM134Q9H6X4 195 aa20■□□□□ 0.79
HMGN1-206ENST00000431390 SCN10AQ9Y5Y9 1956 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 LRRIQ4A6NIV6 560 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 MARSP56192 900 aaKnown RBP19.99■□□□□ 0.79
HMGN1-206ENST00000431390 LAMTOR4Q0VGL1 99 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 TFDP1Q14186 410 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 MARCH8Q5T0T0 291 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 SLC9A9Q8IVB4 645 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 C12orf56Q8IXR9 622 aa19.99■□□□□ 0.79
HMGN1-206ENST00000431390 METTL13Q8N6R0 699 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms