RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 TLL1O43897 1013 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 ERLIN2O94905 339 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 UPP2O95045 317 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 SARSP49591 514 aaKnown RBP20.55■□□□□ 0.88
DDR1-236ENST00000431373 MBTD1Q05BQ5 628 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 CDCA2Q69YH5 1023 aaPredicted RBP20.55■□□□□ 0.88
DDR1-236ENST00000431373 SLC24A5Q71RS6 500 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 DEPTORQ8TB45 409 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 C2orf40Q9H1Z8 148 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 C17orf75Q9HAS0 396 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 AGPAT5Q9NUQ2 364 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 ODF2LQ9ULJ1 636 aa20.55■□□□□ 0.88
DDR1-236ENST00000431373 PIN4Q9Y237 131 aaKnown RBP20.55■□□□□ 0.88
DDR1-236ENST00000431373 C9IYK1 514 aa20.54■□□□□ 0.88
DDR1-236ENST00000431373 KRT18P05783 430 aaKnown RBP20.54■□□□□ 0.88
DDR1-236ENST00000431373 PEX3P56589 373 aa20.54■□□□□ 0.88
DDR1-236ENST00000431373 ADALQ6DHV7 355 aa20.54■□□□□ 0.88
DDR1-236ENST00000431373 SV2BQ7L1I2 683 aa20.54■□□□□ 0.88
DDR1-236ENST00000431373 NPAS4Q8IUM7 802 aa20.54■□□□□ 0.88
DDR1-236ENST00000431373 REEP2Q9BRK0 252 aa20.54■□□□□ 0.88
DDR1-236ENST00000431373 RNF216Q9NWF9 866 aaPredicted RBP20.54■□□□□ 0.88
DDR1-236ENST00000431373 DACT1Q9NYF0 836 aa20.54■□□□□ 0.88
DDR1-236ENST00000431373 CHMP5Q9NZZ3 219 aa20.54■□□□□ 0.88
DDR1-236ENST00000431373 YBX2Q9Y2T7 364 aaKnown RBP20.54■□□□□ 0.88
DDR1-236ENST00000431373 STAG3L1P0CL83 205 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 AXLP30530 894 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 NPTX2P47972 431 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 CACNB1Q02641 598 aaPredicted RBP20.53■□□□□ 0.88
DDR1-236ENST00000431373 DMP1Q13316 513 aaPredicted RBP20.53■□□□□ 0.88
DDR1-236ENST00000431373 GPR153Q6NV75 609 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 TIFAQ96CG3 184 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 RAD9AQ99638 391 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 CUEDC2Q9H467 287 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 GDPD2Q9HCC8 539 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 INSL6Q9Y581 213 aa20.53■□□□□ 0.88
DDR1-236ENST00000431373 FNDC1Q4ZHG4 1894 aaPredicted RBP20.52■□□□□ 0.88
DDR1-236ENST00000431373 CCDC169A6NNP5 214 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 SFI1A8K8P3 1242 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 TSPAN1O60635 241 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 PLS3P13797 630 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 MYOGP15173 224 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 IBSPP21815 317 aaPredicted RBP20.52■□□□□ 0.88
DDR1-236ENST00000431373 CMA1P23946 247 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 EFNA5P52803 228 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 HTRA4P83105 476 aaPredicted RBP20.52■□□□□ 0.88
DDR1-236ENST00000431373 NCBP1Q09161 790 aaKnown RBP20.52■□□□□ 0.88
DDR1-236ENST00000431373 GIT2Q14161 759 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 E2F4Q16254 413 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 AMHR2Q16671 573 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 TWF2Q6IBS0 349 aaKnown RBP20.52■□□□□ 0.88
DDR1-236ENST00000431373 IQUBQ8NA54 791 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 DHX58Q96C10 678 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 KIFC3Q9BVG8 833 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 NKX2-4Q9H2Z4 354 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 KMT5AQ9NQR1 393 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 PRMT7Q9NVM4 692 aaPredicted RBP20.52■□□□□ 0.88
DDR1-236ENST00000431373 KCNG1Q9UIX4 513 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 LRFN2Q9ULH4 789 aa20.52■□□□□ 0.88
DDR1-236ENST00000431373 ADGRA3Q8IWK6 1321 aa20.52■□□□□ 0.87
DDR1-236ENST00000431373 TMEM265A0A087WTH1 108 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 POLR2DO15514 142 aaKnown RBP20.51■□□□□ 0.87
DDR1-236ENST00000431373 FAM13AO94988 1023 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 FAM189BP81408 668 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 MAPK6Q16659 721 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 FAM187BQ17R55 369 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 PPP4R3CPQ6ZMV5 832 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 CRIPAKQ8N1N5 446 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 SPIRE2Q8WWL2 714 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 PRIMPOLQ96LW4 560 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 YME1L1Q96TA2 773 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 PYM1Q9BRP8 204 aaKnown RBP20.51■□□□□ 0.87
DDR1-236ENST00000431373 TRAIPQ9BWF2 469 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 CCDC113Q9H0I3 377 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 FZD8Q9H461 694 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 ELAC1Q9H777 363 aaKnown RBP20.51■□□□□ 0.87
DDR1-236ENST00000431373 TMEM161AQ9NX61 479 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 LARSQ9P2J5 1176 aaKnown RBP20.51■□□□□ 0.87
DDR1-236ENST00000431373 PCDHB7Q9Y5E2 793 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 NLRC5Q86WI3 1866 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 COL4A6Q14031 1691 aa20.51■□□□□ 0.87
DDR1-236ENST00000431373 A0A0U1RQF3 1178 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 MYMKA6NI61 221 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 TBCAO75347 108 aaKnown RBP20.5■□□□□ 0.87
DDR1-236ENST00000431373 PRKCBP05771 671 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 CA3P07451 260 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 HOXA11P31270 313 aaPredicted RBP20.5■□□□□ 0.87
DDR1-236ENST00000431373 ZNF131P52739 623 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 SMTNP53814 917 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 NOTUMQ6P988 496 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 DYMQ7RTS9 669 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 ECHDC2Q86YB7 292 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 DDX12PQ92771 950 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 NTPCRQ9BSD7 190 aaKnown RBP20.5■□□□□ 0.87
DDR1-236ENST00000431373 TNMDQ9H2S6 317 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 SLC28A3Q9HAS3 691 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 PARVGQ9HBI0 331 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 ARHGAP28Q9P2N2 729 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 KCNH3Q9ULD8 1083 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 PHLPP2Q6ZVD8 1323 aa20.5■□□□□ 0.87
DDR1-236ENST00000431373 A0A1W2PQ27 194 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms