RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CHP1Q99653 195 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TUBGCP2Q9BSJ2 902 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 HAUS8Q9BT25 410 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 DDX23Q9BUQ8 820 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 CDK19Q9BWU1 502 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 UNKQ9C0B0 810 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 LRRC27Q9C0I9 530 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 DPH5Q9H2P9 285 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 BOLA2Q9H3K6 86 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TLE6Q9H808 572 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 C10orf88Q9H8K7 445 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 PLGRKTQ9HBL7 147 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 NCOA5Q9HCD5 579 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 GPR108Q9NPR9 543 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 ABCF3Q9NUQ8 709 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TBC1D23Q9NUY8 699 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TYW1Q9NV66 732 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 FAIMQ9NVQ4 179 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 NDE1Q9NXR1 346 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TMEM59LQ9UK28 342 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 CHMP2BQ9UQN3 213 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 HBS1LQ9Y450 684 aaKnown RBP6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 TTLL3Q9Y4R7 772 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 CAPN6Q9Y6Q1 641 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 FLT4P35916 1363 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 KAT6BQ8WYB5 2073 aa6.02□□□□□ -1.45
VTI1BP4-201ENST00000427516 C3P01024 1663 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF609O15014 1411 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 USP6P35125 1406 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 MYO5AQ9Y4I1 1855 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 A0A0A6YYK5 440 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 TRIM43BA6NCK2 446 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 KRIT1O00522 736 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF213O14771 459 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 HOXA2O43364 376 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 HNRNPRO43390 633 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 RAD51CO43502 376 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 IDH3BO43837 385 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 OPHN1O60890 802 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PHF2O75151 1096 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 CSDE1O75534 798 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 GFPT2O94808 682 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 TPPPO94811 219 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 BAIAP3O94812 1187 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 MOCS3O95396 460 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 SERPING1P05155 500 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PIM1P11309 404 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 MAN1A1P33908 653 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 LONP1P36776 959 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PPARGP37231 505 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 EPS15P42566 896 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 LIFRP42702 1097 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 RPL5P46777 297 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 SLC18A1P54219 525 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 NPEPPSP55786 919 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 BPIFB4P59827 614 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 CAV1Q03135 178 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 BTG3Q14201 252 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PLS1Q14651 629 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 NAB2Q15742 525 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 DNAL1Q4LDG9 190 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 COBLL1Q53SF7 1204 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 SLC45A4Q5BKX6 768 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ARL6IP4Q66PJ3 421 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 GALNT17Q6IS24 598 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 AAGABQ6PD74 315 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 WDR59Q6PJI9 974 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 FRA10AC1Q70Z53 315 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 MIER3Q7Z3K6 550 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ADGRG6Q86SQ4 1221 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 FOXP4Q8IVH2 680 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZSCAN29Q8IWY8 852 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 SPICE1Q8N0Z3 855 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 DEPTORQ8TB45 409 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 FNDC8Q8TC99 324 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZNF507Q8TCN5 953 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PLEKHO2Q8TD55 490 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 DDX54Q8TDD1 881 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ZC3H15Q8WU90 426 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 SCG3Q8WXD2 468 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 JADE3Q92613 823 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ARHGEF2Q92974 986 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ABTB1Q969K4 478 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 SGF29Q96ES7 293 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 ANKRD36BP1Q96IX9 119 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 BIRC8Q96P09 236 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 INPP4AQ96PE3 977 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PRMT1Q99873 361 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 USB1Q9BQ65 265 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 NOC4LQ9BVI4 516 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PLVAPQ9BX97 442 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 TLR10Q9BXR5 811 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 PITPNM3Q9BZ71 974 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 FHDC1Q9C0D6 1143 aaPredicted RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 TTYH3Q9C0H2 523 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 LACRTQ9GZZ8 138 aa6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 MRPL46Q9H2W6 279 aaKnown RBP6.01□□□□□ -1.45
VTI1BP4-201ENST00000427516 GPAMQ9HCL2 828 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms