RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 ZBTB8OSQ8IWT0 167 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 DAW1Q8N136 415 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 YME1L1Q96TA2 773 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 C2orf40Q9H1Z8 148 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 SLC28A3Q9HAS3 691 aa27.82■■■□□ 2.04
HERPUD2-205ENST00000427455 MAPK7Q13164 816 aa27.81■■■□□ 2.04
HERPUD2-205ENST00000427455 MCM6Q14566 821 aa27.81■■■□□ 2.04
HERPUD2-205ENST00000427455 PPP2R2DQ66LE6 453 aa27.81■■■□□ 2.04
HERPUD2-205ENST00000427455 CRIPAKQ8N1N5 446 aa27.81■■■□□ 2.04
HERPUD2-205ENST00000427455 LEO1Q8WVC0 666 aaPredicted RBP27.81■■■□□ 2.04
HERPUD2-205ENST00000427455 SPATA32Q96LK8 384 aa27.81■■■□□ 2.04
HERPUD2-205ENST00000427455 POLD4Q9HCU8 107 aa27.81■■■□□ 2.04
HERPUD2-205ENST00000427455 PCDHA7Q9UN72 937 aa27.81■■■□□ 2.04
HERPUD2-205ENST00000427455 STAT6P42226 847 aa27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 DMP1Q13316 513 aaPredicted RBP27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 DHX8Q14562 1220 aaKnown RBP27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 SHC4Q6S5L8 630 aa27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 DEPTORQ8TB45 409 aa27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 CHAMP1Q96JM3 812 aa27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 TTYH1Q9H313 450 aaPredicted RBP27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 C17orf75Q9HAS0 396 aa27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 LRFN2Q9ULH4 789 aa27.8■■■□□ 2.04
HERPUD2-205ENST00000427455 LCHNA4D1U4 455 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 TSPAN1O60635 241 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 FAM189BP81408 668 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 RAD51AP2Q09MP3 1159 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 NAALADL2Q58DX5 795 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 ARSHQ5FYA8 562 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 TWF2Q6IBS0 349 aaKnown RBP27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 DEFB123Q8N688 67 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 SP7Q8TDD2 431 aaPredicted RBP27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 TRAIPQ9BWF2 469 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 SCAND2PQ9GZW5 306 aaPredicted RBP27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 ZNF576Q9H609 170 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 ELAC1Q9H777 363 aaKnown RBP27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 TMEM161AQ9NX61 479 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 ODF2LQ9ULJ1 636 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 CIZ1Q9ULV3 898 aaPredicted RBP27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 PCDHB7Q9Y5E2 793 aa27.79■■■□□ 2.04
HERPUD2-205ENST00000427455 A0A087X0B3 334 aa27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 IBSPP21815 317 aaPredicted RBP27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 AXLP30530 894 aa27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 NCBP1Q09161 790 aaKnown RBP27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 AMHR2Q16671 573 aa27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 Q7L0L9 218 aa27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 PRIMPOLQ96LW4 560 aa27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 RC3H2Q9HBD1 1191 aaKnown RBP27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 PRMT7Q9NVM4 692 aaPredicted RBP27.78■■■□□ 2.04
HERPUD2-205ENST00000427455 ADGRA3Q8IWK6 1321 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 A0A0U1RQF3 1178 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 DGKIO75912 1065 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 HOXA11P31270 313 aaPredicted RBP27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 NPTX2P47972 431 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 PEX3P56589 373 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 PPP4R3CPQ6ZMV5 832 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 PDILTQ8N807 584 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 CCDC51Q96ER9 411 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 REEP2Q9BRK0 252 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 KIFC3Q9BVG8 833 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 SEMA6BQ9H3T3 888 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 CDH23Q9H251 3354 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 MYH11P35749 1972 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 TCHHQ07283 1943 aa27.77■■■□□ 2.04
HERPUD2-205ENST00000427455 NPHP3-ACAD11A0A0J9YXS1 232 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 KRT18P05783 430 aaKnown RBP27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 PLS3P13797 630 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 RAB27AP51159 221 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 EFNA5P52803 228 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 TAP1Q03518 808 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 FAM187BQ17R55 369 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 RESP18Q5W5W9 173 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 NOTUMQ6P988 496 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 ECHDC2Q86YB7 292 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 ZNF689Q96CS4 500 aaPredicted RBP27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 PANK2Q9BZ23 570 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 CCDC113Q9H0I3 377 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 FZD8Q9H461 694 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 FAM13BQ9NYF5 915 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 KCNG1Q9UIX4 513 aa27.76■■■□□ 2.03
HERPUD2-205ENST00000427455 PHLPP2Q6ZVD8 1323 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 LINC01553A4QN01 128 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 CCDC169A6NNP5 214 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 ARHGEF15O94989 841 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 SKIP12755 728 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 CACNB1Q02641 598 aaPredicted RBP27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 MAPK6Q16659 721 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 SV2BQ7L1I2 683 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 FAM161BQ96MY7 647 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 KMT5AQ9NQR1 393 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 FAM105AQ9NUU6 356 aa27.75■■■□□ 2.03
HERPUD2-205ENST00000427455 CNTNAP2Q9UHC6 1331 aa27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 SFI1A8K8P3 1242 aa27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 PRKCBP05771 671 aa27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 E2F4Q16254 413 aa27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 SPIRE2Q8WWL2 714 aa27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 CUEDC2Q9H467 287 aa27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 LARSQ9P2J5 1176 aaKnown RBP27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 ARHGAP28Q9P2N2 729 aa27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 CHD7Q9P2D1 2997 aa27.74■■■□□ 2.03
HERPUD2-205ENST00000427455 B4GALT5O43286 388 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms