RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 KCNK18Q7Z418 384 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 FRMD5Q7Z6J6 570 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 PPP1R14CQ8TAE6 165 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 GCDHQ92947 438 aaPredicted RBP3.53□□□□□ -1.84
VPS41-206ENST00000418457 SLC7A6OSQ96CW6 309 aaPredicted RBP3.53□□□□□ -1.84
VPS41-206ENST00000418457 FUBP3Q96I24 572 aaKnown RBP eCLIP3.53□□□□□ -1.84
VPS41-206ENST00000418457 FAXDC2Q96IV6 333 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 PUS7Q96PZ0 661 aaKnown RBP3.53□□□□□ -1.84
VPS41-206ENST00000418457 UIMC1Q96RL1 719 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 FDXACB1Q9BRP7 624 aaPredicted RBP3.53□□□□□ -1.84
VPS41-206ENST00000418457 SOX7Q9BT81 388 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 XYLT2Q9H1B5 865 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 IFT122Q9HBG6 1241 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 NR2E1Q9Y466 385 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 CTDP1Q9Y5B0 961 aaPredicted RBP3.53□□□□□ -1.84
VPS41-206ENST00000418457 RBM8AQ9Y5S9 174 aaKnown RBP3.53□□□□□ -1.84
VPS41-206ENST00000418457 GPR45Q9Y5Y3 372 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 MRFAP1Q9Y605 127 aa3.53□□□□□ -1.84
VPS41-206ENST00000418457 CEP162Q5TB80 1403 aa3.53□□□□□ -1.85
VPS41-206ENST00000418457 C2orf78A6NCI8 922 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 LAMTOR5O43504 91 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 XPOTO43592 962 aaKnown RBP3.52□□□□□ -1.85
VPS41-206ENST00000418457 ALDH1L1O75891 902 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 LY86O95711 162 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 INHBBP09529 407 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 GAAP10253 952 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 RBP3P10745 1247 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 AGXTP21549 392 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 MTNR1BP49286 362 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 NEK2P51955 445 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 CCT2P78371 535 aaKnown RBP3.52□□□□□ -1.85
VPS41-206ENST00000418457 KRT85P78386 507 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 CD69Q07108 199 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 NFYCQ13952 458 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 ACAP2Q15057 778 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 PCBP2Q15366 365 aaKnown RBP eCLIP3.52□□□□□ -1.853e-8■■■■■ 34.3
VPS41-206ENST00000418457 TBR1Q16650 682 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 RNF151Q2KHN1 245 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 ANO4Q32M45 955 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 PLEKHG6Q3KR16 790 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 UBXN11Q5T124 520 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 CLEC14AQ86T13 490 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 ZBTB46Q86UZ6 589 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 PNMA8AQ86V59 439 aaPredicted RBP3.52□□□□□ -1.85
VPS41-206ENST00000418457 KRTAP19-1Q8IUB9 90 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 UNC5BQ8IZJ1 945 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 FAM9AQ8IZU1 332 aaPredicted RBP3.52□□□□□ -1.85
VPS41-206ENST00000418457 PLA2G15Q8NCC3 412 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 PIK3C3Q8NEB9 887 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 OR14K1Q8NGZ2 314 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 TSPEARQ8WU66 669 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 SSH1Q8WYL5 1049 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 PAWRQ96IZ0 340 aaKnown RBP3.52□□□□□ -1.85
VPS41-206ENST00000418457 ACE2Q9BYF1 805 aaPredicted RBP3.52□□□□□ -1.85
VPS41-206ENST00000418457 C14orf93Q9H972 538 aaKnown RBP3.52□□□□□ -1.85
VPS41-206ENST00000418457 SEC61A2Q9H9S3 476 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 JADE2Q9NQC1 790 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 PUF60Q9UHX1 559 aaKnown RBP3.52□□□□□ -1.85
VPS41-206ENST00000418457 DUSP10Q9Y6W6 482 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 GOLGA3Q08378 1498 aa3.52□□□□□ -1.85
VPS41-206ENST00000418457 ZNF536O15090 1300 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 KLHL33A6NCF5 533 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 FZD9O00144 591 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 CNOT4O95628 575 aaKnown RBP3.51□□□□□ -1.85
VPS41-206ENST00000418457 S100BP04271 92 aaPredicted RBP3.51□□□□□ -1.85
VPS41-206ENST00000418457 EPHB4P54760 987 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 BPIFB4P59827 614 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 RAC3P60763 192 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 ATP2C1P98194 919 aaPredicted RBP3.51□□□□□ -1.85
VPS41-206ENST00000418457 FZD5Q13467 585 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 TCIRG1Q13488 830 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 TTF1Q15361 905 aaPredicted RBP3.51□□□□□ -1.85
VPS41-206ENST00000418457 ZFYVE27Q5T4F4 411 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 MBNL2Q5VZF2 373 aaKnown RBP3.51□□□□□ -1.85
VPS41-206ENST00000418457 KRT40Q6A162 431 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 SPOCD1Q6ZMY3 1216 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 FATE1Q969F0 183 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 CHMP4CQ96CF2 233 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 NEIL1Q96FI4 390 aaPredicted RBP3.51□□□□□ -1.85
VPS41-206ENST00000418457 TEPSINQ96N21 525 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 SLC2A13Q96QE2 648 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 LMF1Q96S06 567 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 SLC13A1Q9BZW2 595 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 SLC6A15Q9H2J7 730 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 ADAM7Q9H2U9 754 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 C12orf65Q9H3J6 166 aaKnown RBP3.51□□□□□ -1.85
VPS41-206ENST00000418457 ZNF277Q9NRM2 450 aaPredicted RBP3.51□□□□□ -1.85
VPS41-206ENST00000418457 ZBTB21Q9ULJ3 1066 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 KIF21BO75037 1637 aa3.51□□□□□ -1.85
VPS41-206ENST00000418457 BAZ1BQ9UIG0 1483 aaKnown RBP3.5□□□□□ -1.85
VPS41-206ENST00000418457 A0A1W2PR48 441 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 MTSS1O43312 755 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 PCDHGA12O60330 932 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 PRAMEF4O60810 478 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 ALDH1A2O94788 518 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 TOX4O94842 621 aa3.5□□□□□ -1.85
VPS41-206ENST00000418457 SNUPNO95149 360 aaKnown RBP3.5□□□□□ -1.85
VPS41-206ENST00000418457 JUNP05412 331 aaKnown RBP3.5□□□□□ -1.85
VPS41-206ENST00000418457 LTA4HP09960 611 aaKnown RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms