RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 TAL1P17542 331 aaPredicted RBP10.59□□□□□ -0.71
CD44-206ENST00000415148 E2F5Q15329 346 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 PODNQ7Z5L7 613 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 DHX37Q8IY37 1157 aaKnown RBP10.59□□□□□ -0.71
CD44-206ENST00000415148 SLC5A5Q92911 643 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 TATDN2Q93075 761 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 PGM2Q96G03 612 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 NACC1Q96RE7 527 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 INTS2Q9H0H0 1204 aaKnown RBP10.59□□□□□ -0.71
CD44-206ENST00000415148 ZDHHC18Q9NUE0 388 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 RGL1Q9NZL6 768 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 PARP2Q9UGN5 583 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 CNOT7Q9UIV1 285 aaKnown RBP10.59□□□□□ -0.71
CD44-206ENST00000415148 ATP8A1Q9Y2Q0 1164 aa10.59□□□□□ -0.71
CD44-206ENST00000415148 GOLGA6L7A0A1B0GV03 622 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 G3V3G9 751 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 PODXLO00592 558 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 P4HA2O15460 535 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 NDUFB10O96000 172 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 BCRP11274 1271 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 SCP2P22307 547 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 HMGB2P26583 209 aaKnown RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 NMT1P30419 496 aaKnown RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 IFFO1Q0D2I5 559 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 ZNF211Q13398 564 aaPredicted RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 PREPLQ4J6C6 727 aaPredicted RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 LACTB2Q53H82 288 aaPredicted RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 DCAF8Q5TAQ9 597 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 C11orf63Q6NUN7 778 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 UHMK1Q8TAS1 419 aaKnown RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 GLG1Q92896 1179 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 RUNDC3BQ96NL0 473 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 RPS6KC1Q96S38 1066 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 FIZ1Q96SL8 496 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 STRA6Q9BX79 667 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 FAM129AQ9BZQ8 928 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 PABPC3Q9H361 631 aaKnown RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 KCNQ5Q9NR82 932 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 AGPAT3Q9NRZ7 376 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 SYNGAP1Q96PV0 1343 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 DDTLA6NHG4 134 aaPredicted RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 SMIM23A6NLE4 172 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 CCDC169A6NNP5 214 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 SFI1A8K8P3 1242 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 CHUKO15111 745 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 ALDH1B1P30837 517 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 CHRNA3P32297 505 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 PRELPP51888 382 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 CTTNQ14247 550 aaKnown RBP10.58□□□□□ -0.72
CD44-206ENST00000415148 ABCB5Q2M3G0 1257 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 USH1GQ495M9 461 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 KIAA1755Q5JYT7 1200 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 SLC30A10Q6XR72 485 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 EP400NLQ6ZTU2 488 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 RPAINQ86UA6 219 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 CEP57Q86XR8 500 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 TPH2Q8IWU9 490 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 PARP9Q8IXQ6 854 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 FAM178BQ8IXR5 827 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 CACNA2D3Q8IZS8 1091 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 UBL4BQ8N7F7 174 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 DYDC2Q96IM9 177 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 SCLT1Q96NL6 688 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 AGPAT1Q99943 283 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 TMEM109Q9BVC6 243 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 WDR11Q9BZH6 1224 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 ADAM7Q9H2U9 754 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 EHMT1Q9H9B1 1298 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 FAM198AQ9UFP1 575 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 PCYOX1Q9UHG3 505 aa10.58□□□□□ -0.72
CD44-206ENST00000415148 ADAMTSL1Q8N6G6 1762 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 PHF2O75151 1096 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 MAPTP10636 758 aaKnown RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 GHRP10912 638 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 NPR1P16066 1061 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 VCAM1P19320 739 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 PMS2P54278 862 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 IFI35P80217 286 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 MYL7Q01449 175 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 BFSP1Q12934 665 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 ALCAMQ13740 583 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 SHROOM1Q2M3G4 852 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 NBPF9Q3BBW0 867 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 CBWD6Q4V339 395 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 ZC2HC1CQ53FD0 456 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 CBWD3Q5JTY5 395 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 CBWD5Q5RIA9 395 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 ERMARDQ5T6L9 678 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 GKAP1Q5VSY0 366 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 LRCH2Q5VUJ6 765 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 PAXIP1Q6ZW49 1069 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 PALB2Q86YC2 1186 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 CYP2W1Q8TAV3 490 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 PIGOQ8TEQ8 1089 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 CCT6BQ92526 530 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 FAM212AQ96EL1 285 aa10.57□□□□□ -0.72
CD44-206ENST00000415148 TMX4Q9H1E5 349 aaPredicted RBP10.57□□□□□ -0.72
CD44-206ENST00000415148 KDM4CQ9H3R0 1056 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms