RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 B4GALT4O60513 344 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 CAVIN2O95810 425 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 CASP5P51878 434 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 EFNA5P52803 228 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 CHMP4BP1P59074 171 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 PTENP60484 403 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 TFDP1Q14186 410 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 FAM187BQ17R55 369 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 DPCR1Q3MIW9 517 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 FAM26DQ5JW98 314 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 STXBP4Q6ZWJ1 553 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 HAUS6Q7Z4H7 955 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 NECAB2Q7Z6G3 386 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 MAP4K3Q8IVH8 894 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 ADSSL1Q8N142 457 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 GLIS3Q8NEA6 775 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 DIS3LQ8TF46 1054 aaKnown RBP12.79□□□□□ -0.36
HDAC9-206ENST00000413380 TMEM174Q8WUU8 243 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 SCFD1Q8WVM8 642 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 DNAJB3Q8WWF6 145 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 DHX38Q92620 1227 aaKnown RBP12.79□□□□□ -0.36
HDAC9-206ENST00000413380 WNT8BQ93098 351 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 HPS3Q969F9 1004 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 VTI1AQ96AJ9 217 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 FGFBP2Q9BYJ0 223 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
HDAC9-206ENST00000413380 C2orf40Q9H1Z8 148 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 C11orf49Q9H6J7 331 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 TMEM134Q9H6X4 195 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 MRPL44Q9H9J2 332 aaKnown RBP12.79□□□□□ -0.36
HDAC9-206ENST00000413380 IFT122Q9HBG6 1241 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 POLD4Q9HCU8 107 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 KMT5AQ9NQR1 393 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 GDAQ9Y2T3 454 aa12.79□□□□□ -0.36
HDAC9-206ENST00000413380 KIF20AO95235 890 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 VTNP04004 478 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 NMT1P30419 496 aaKnown RBP12.78□□□□□ -0.36
HDAC9-206ENST00000413380 HOXD13P35453 343 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 PRCPP42785 496 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 MGAT3Q09327 533 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 PCBP1Q15365 356 aaKnown RBP eCLIP12.78□□□□□ -0.36
HDAC9-206ENST00000413380 L1TD1Q5T7N2 865 aaKnown RBP12.78□□□□□ -0.36
HDAC9-206ENST00000413380 TAS1R3Q7RTX0 852 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 SRGAP1Q7Z6B7 1085 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 RSPH3Q86UC2 560 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 RHPN2Q8IUC4 686 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 MYOCDQ8IZQ8 938 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 RNF149Q8NC42 400 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 CAGE1Q8TC20 777 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 DHTKD1Q96HY7 919 aaPredicted RBP12.78□□□□□ -0.36
HDAC9-206ENST00000413380 PAWRQ96IZ0 340 aaKnown RBP12.78□□□□□ -0.36
HDAC9-206ENST00000413380 BPIFA3Q9BQP9 254 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 ZHX3Q9H4I2 956 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 SLC39A2Q9NP94 309 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 TRMT13Q9NUP7 481 aaKnown RBP12.78□□□□□ -0.36
HDAC9-206ENST00000413380 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 AKT3Q9Y243 479 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 ZMYM2Q9UBW7 1377 aa12.78□□□□□ -0.36
HDAC9-206ENST00000413380 LRRIQ4A6NIV6 560 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 K7ENM7 598 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 SLC16A4O15374 487 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 GCNT3O95395 438 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 PIGRP01833 764 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 MYBP10242 640 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 ERCC5P28715 1186 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-206ENST00000413380 PHKA2P46019 1235 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 ATN1P54259 1190 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-206ENST00000413380 NLRP11P59045 1033 aaKnown RBP12.77□□□□□ -0.37
HDAC9-206ENST00000413380 SNRPFP62306 86 aaKnown RBP12.77□□□□□ -0.37
HDAC9-206ENST00000413380 MRPS6P82932 125 aaKnown RBP12.77□□□□□ -0.37
HDAC9-206ENST00000413380 ZCWPW2Q504Y3 356 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 CENPPQ6IPU0 288 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 TRAF7Q6Q0C0 670 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 KSR1Q8IVT5 923 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 SMYD4Q8IYR2 804 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-206ENST00000413380 PRIMPOLQ96LW4 560 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 FAM49AQ9H0Q0 323 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-206ENST00000413380 GZF1Q9H116 711 aaPredicted RBP12.77□□□□□ -0.37
HDAC9-206ENST00000413380 TRPV6Q9H1D0 765 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 KCTD10Q9H3F6 313 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 FZD8Q9H461 694 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 SQORQ9Y6N5 450 aa12.77□□□□□ -0.37
HDAC9-206ENST00000413380 A0A087WZ62 844 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 DENND3A2RUS2 1198 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 CCDC169A6NNP5 214 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 PSMA7O14818 248 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 DARSP14868 501 aaKnown RBP12.76□□□□□ -0.37
HDAC9-206ENST00000413380 CRYBB1P53674 252 aaPredicted RBP12.76□□□□□ -0.37
HDAC9-206ENST00000413380 MBTD1Q05BQ5 628 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 STIM1Q13586 685 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 NFIL3Q16649 462 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 AMHR2Q16671 573 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 KNOP1Q1ED39 458 aaKnown RBP12.76□□□□□ -0.37
HDAC9-206ENST00000413380 ZC2HC1CQ53FD0 456 aaPredicted RBP12.76□□□□□ -0.37
HDAC9-206ENST00000413380 COL13A1Q5TAT6 717 aaPredicted RBP12.76□□□□□ -0.37
HDAC9-206ENST00000413380 ISM2Q6H9L7 571 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 FAM43BQ6ZT52 329 aaPredicted RBP12.76□□□□□ -0.37
HDAC9-206ENST00000413380 ZBTB8OSQ8IWT0 167 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 DEPTORQ8TB45 409 aa12.76□□□□□ -0.37
HDAC9-206ENST00000413380 NLRP4Q96MN2 994 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms