RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 A0A1W2PQY0 241 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 SSU72P8A0A1W2PR75 194 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 hCG_1984214I3L0E3 225 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 NCAM2O15394 837 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 FKTNO75072 461 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 ALDH2P05091 517 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 IL12RB1P42701 662 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 RXRGP48443 463 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 JAG1P78504 1218 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 MRPS9P82933 396 aaKnown RBP5.86□□□□□ -1.47
LSM5-205ENST00000409952 ICA1Q05084 483 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 MOGSQ13724 837 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 UGT8Q16880 541 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.86□□□□□ -1.47
LSM5-205ENST00000409952 CCDC38Q502W7 563 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 INTS11Q5TA45 600 aaKnown RBP5.86□□□□□ -1.47
LSM5-205ENST00000409952 MBLAC2Q68D91 279 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 TTLL5Q6EMB2 1281 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 MZT2BQ6NZ67 158 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 CC2D1AQ6P1N0 951 aaPredicted RBP5.86□□□□□ -1.47
LSM5-205ENST00000409952 CFAP161Q6P656 301 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 ARHGAP36Q6ZRI8 547 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 SYDE1Q6ZW31 735 aaPredicted RBP5.86□□□□□ -1.47
LSM5-205ENST00000409952 SIRT2Q8IXJ6 389 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 GIMAP8Q8ND71 665 aaPredicted RBP5.86□□□□□ -1.47
LSM5-205ENST00000409952 NSUN6Q8TEA1 469 aaKnown RBP5.86□□□□□ -1.47
LSM5-205ENST00000409952 PHKBQ93100 1093 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 INTS4Q96HW7 963 aaKnown RBP5.86□□□□□ -1.47
LSM5-205ENST00000409952 CHAMP1Q96JM3 812 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 SLC6A17Q9H1V8 727 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 STARD7Q9NQZ5 370 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 AP5S1Q9NUS5 200 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 CLDND1Q9NY35 253 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 FBXL7Q9UJT9 491 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 HDAC9Q9UKV0 1011 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 TIMM13Q9Y5L4 95 aaPredicted RBP5.86□□□□□ -1.47
LSM5-205ENST00000409952 B3GALT1Q9Y5Z6 326 aa5.86□□□□□ -1.47
LSM5-205ENST00000409952 HRKO00198 91 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 KCNK3O14649 394 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 KPNA5O15131 536 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 FGF10O15520 208 aaPredicted RBP5.85□□□□□ -1.47
LSM5-205ENST00000409952 GNAT1P11488 350 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 TECP42680 631 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 RPL11P62913 178 aaKnown RBP5.85□□□□□ -1.47
LSM5-205ENST00000409952 SPIRE1Q08AE8 756 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 EPHA7Q15375 998 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 TOMM20Q15388 145 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 ZNF124Q15973 351 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 HSF5Q4G112 596 aaPredicted RBP5.85□□□□□ -1.47
LSM5-205ENST00000409952 CT83Q5H943 113 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 MBNL2Q5VZF2 373 aaKnown RBP5.85□□□□□ -1.47
LSM5-205ENST00000409952 SWSAP1Q6NVH7 229 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 MPZL3Q6UWV2 235 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 CYP26C1Q6V0L0 522 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 C1orf122Q6ZSJ8 110 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 DAAM2Q86T65 1068 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 FBXO15Q8NCQ5 510 aaPredicted RBP5.85□□□□□ -1.47
LSM5-205ENST00000409952 DLG3Q92796 817 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 ARL8AQ96BM9 186 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 EAF2Q96CJ1 260 aaPredicted RBP5.85□□□□□ -1.47
LSM5-205ENST00000409952 RAX2Q96IS3 184 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 ZNF496Q96IT1 587 aaPredicted RBP5.85□□□□□ -1.47
LSM5-205ENST00000409952 CGRRF1Q99675 332 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 ZNF552Q9H707 407 aaPredicted RBP5.85□□□□□ -1.47
LSM5-205ENST00000409952 ACSL6Q9UKU0 697 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 EDARQ9UNE0 448 aa5.85□□□□□ -1.47
LSM5-205ENST00000409952 WTIPA6NIX2 430 aaPredicted RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 FOXN3O00409 490 aaPredicted RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 FIBPO43427 364 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 NCK2O43639 380 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 PEX10O60683 326 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 CNOT4O95628 575 aaKnown RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 TSPAN15O95858 294 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 GSTM1P09488 218 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 MED14OSP0DP75 135 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 PNLIPP16233 465 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 RPL17P18621 184 aaKnown RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 BCL6P41182 706 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 MANFP55145 182 aaKnown RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 RTP1P59025 263 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 ANO4Q32M45 955 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 FIGNQ5HY92 759 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 HABP4Q5JVS0 413 aaKnown RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 FAM209BQ5JX69 171 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 EP400NLQ6ZTU2 488 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 CEP128Q6ZU80 1094 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 MAEAQ7L5Y9 396 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 PPM1NQ8N819 430 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 MARCH10Q8NA82 808 aaPredicted RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 ZSCAN18Q8TBC5 510 aaPredicted RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 AUTS2Q8WXX7 1259 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 RTF1Q92541 710 aaKnown RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 TBC1D20Q96BZ9 403 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 ZC3H10Q96K80 434 aaKnown RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 JAM3Q9BX67 310 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 EPB41L4BQ9H329 900 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 NSUN3Q9H649 340 aaKnown RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 KIAA1586Q9HCI6 787 aa5.84□□□□□ -1.47
LSM5-205ENST00000409952 DCP1AQ9NPI6 582 aaPredicted RBP5.84□□□□□ -1.47
LSM5-205ENST00000409952 GPR160Q9UJ42 338 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms