RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CHAMP1Q96JM3 812 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 YME1L1Q96TA2 773 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 C17orf75Q9HAS0 396 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 AGPAT5Q9NUQ2 364 aa21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 PIN4Q9Y237 131 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-207ENST00000409417 PTPRSQ13332 1948 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 HOXA11P31270 313 aaPredicted RBP21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 MCM6Q14566 821 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 NAALADL2Q58DX5 795 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 ARSHQ5FYA8 562 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 SHC4Q6S5L8 630 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 GPBP1Q86WP2 473 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 ZBTB8OSQ8IWT0 167 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 DEFB123Q8N688 67 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 LEO1Q8WVC0 666 aaPredicted RBP21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 SPATA32Q96LK8 384 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 TRAIPQ9BWF2 469 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 C2orf40Q9H1Z8 148 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 TTYH1Q9H313 450 aaPredicted RBP21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 SEMA6BQ9H3T3 888 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 ZNF576Q9H609 170 aa21.95■■□□□ 1.1
PDLIM2-207ENST00000409417 A0A0U1RQF3 1178 aa21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 ERLIN2O94905 339 aa21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 NCBP1Q09161 790 aaKnown RBP21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 RAD51AP2Q09MP3 1159 aa21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 DHX8Q14562 1220 aaKnown RBP21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 PPP2R2DQ66LE6 453 aa21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 DEPTORQ8TB45 409 aa21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 PANK2Q9BZ23 570 aa21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 SCAND2PQ9GZW5 306 aaPredicted RBP21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 ELAC1Q9H777 363 aaKnown RBP21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 LRFN2Q9ULH4 789 aa21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 PCDHB7Q9Y5E2 793 aa21.94■■□□□ 1.1
PDLIM2-207ENST00000409417 A0A087X0B3 334 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 LCHNA4D1U4 455 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 TSPAN1O60635 241 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 DGKIO75912 1065 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 AXLP30530 894 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 DMP1Q13316 513 aaPredicted RBP21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 AMHR2Q16671 573 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 TWF2Q6IBS0 349 aaKnown RBP21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 Q7L0L9 218 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 SP7Q8TDD2 431 aaPredicted RBP21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 TMEM161AQ9NX61 479 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 CHD7Q9P2D1 2997 aa21.93■■□□□ 1.1
PDLIM2-207ENST00000409417 STAT6P42226 847 aa21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 NPTX2P47972 431 aa21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 EFNA5P52803 228 aa21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 FAM187BQ17R55 369 aa21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 PDILTQ8N807 584 aa21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 NTPCRQ9BSD7 190 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 FZD8Q9H461 694 aa21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 RC3H2Q9HBD1 1191 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 KCNG1Q9UIX4 513 aa21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 ODF2LQ9ULJ1 636 aa21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 CIZ1Q9ULV3 898 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-207ENST00000409417 NPHP3-ACAD11A0A0J9YXS1 232 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 SFI1A8K8P3 1242 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 PLS3P13797 630 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 PEX3P56589 373 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 TAP1Q03518 808 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 RESP18Q5W5W9 173 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 PPP4R3CPQ6ZMV5 832 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 SV2BQ7L1I2 683 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 ECHDC2Q86YB7 292 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 SPIRE2Q8WWL2 714 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 ZNF689Q96CS4 500 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 PRIMPOLQ96LW4 560 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 REEP2Q9BRK0 252 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 KIFC3Q9BVG8 833 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 PRMT7Q9NVM4 692 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 RBM19Q9Y4C8 960 aaKnown RBP21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 CDH23Q9H251 3354 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 ADGRA3Q8IWK6 1321 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 GBF1Q92538 1859 aa21.91■■□□□ 1.1
PDLIM2-207ENST00000409417 LINC01553A4QN01 128 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 CCDC169A6NNP5 214 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 ARHGEF15O94989 841 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 EOMESO95936 686 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 SKIP12755 728 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 IBSPP21815 317 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 RAB27AP51159 221 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 GIT2Q14161 759 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 MAPK6Q16659 721 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 NOTUMQ6P988 496 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 CCDC51Q96ER9 411 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 CCDC113Q9H0I3 377 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 MYO9BQ13459 2157 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 ZNF623O75123 536 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 KRT18P05783 430 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 ARF4P18085 180 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 SMTNP53814 917 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 E2F4Q16254 413 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 ADALQ6DHV7 355 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 ZNF598Q86UK7 904 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 IQUBQ8NA54 791 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 FAM161BQ96MY7 647 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 CUEDC2Q9H467 287 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 KMT5AQ9NQR1 393 aa21.9■■□□□ 1.1
PDLIM2-207ENST00000409417 FAM105AQ9NUU6 356 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms