RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 DDHD1Q8NEL9 900 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 RIN3Q8TB24 985 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 USP44Q9H0E7 712 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 USP40Q9NVE5 1235 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 HEY1Q9Y5J3 304 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 LRRC53A6NM62 1247 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 DNALI1O14645 258 aaPredicted RBP8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 STRNO43815 780 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 NDUFA10O95299 355 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 GAP43P17677 238 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 NR1H3Q13133 447 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 MTHFSDQ2M296 383 aaKnown RBP8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 TRAPPC3LQ5T215 181 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 CENPPQ6IPU0 288 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 EMBQ6PCB8 327 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 TTLL7Q6ZT98 887 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 ARHGEF25Q86VW2 580 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 PPM1NQ8N819 430 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 HEMGNQ9BXL5 484 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 ADAM21Q9UKJ8 722 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 HPCAL4Q9UM19 191 aa8.37□□□□□ -1.07
RBFOX2-205ENST00000405409 TK2O00142 265 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 SERPIND1P05546 499 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 RALBP11234 206 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 NFKBIAP25963 317 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 SERPINB4P48594 390 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 C16orf72Q14CZ0 275 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 EAPPQ56P03 285 aaPredicted RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 KIAA1841Q6NSI8 718 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 SARM1Q6SZW1 724 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 VPS50Q96JG6 964 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 SRPK1Q96SB4 655 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 ALG13Q9NP73 1137 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 LTBP4Q8N2S1 1624 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 NEMP1O14524 444 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 GNPATO15228 680 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 PDE8AO60658 829 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 ITGAXP20702 1163 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 UBXN2AP68543 259 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 COX10Q12887 443 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 GRAMD1CQ8IYS0 662 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 EME1Q96AY2 570 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 ZNF274Q96GC6 653 aaPredicted RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 BRIP1Q9BX63 1249 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 PLCH2O75038 1416 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 SCAF11Q99590 1463 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 STK25O00506 426 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 EIF2S1P05198 315 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 GCFC2P16383 781 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 ERICH1Q86X53 443 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 UNC45BQ8IWX7 931 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 TRIM63Q969Q1 353 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 DSCC1Q9BVC3 393 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 RGL1Q9NZL6 768 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 BLOC1S6Q9UL45 172 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 TCOF1Q13428 1488 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 HNRNPRO43390 633 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 THEMIS2Q5TEJ8 643 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 TAS2R42Q7RTR8 314 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 C16orf62Q7Z3J2 963 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 TEX2Q8IWB9 1127 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 MAGEF1Q9HAY2 307 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 PARVBQ9HBI1 364 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 MYBL1P10243 752 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 DDX5P17844 614 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 C1orf228Q6PIY5 440 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 UXS1Q8NBZ7 420 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 PDZK1P1A8MUH7 402 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 TCP11X1B4DZS4 312 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 INO80B-WBP1J3KQ70 363 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 MTRF1O75570 445 aaKnown RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 ENO3P13929 434 aaPredicted RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 KCNA6P17658 529 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 CDC27P30260 824 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 SLC16A1P53985 500 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 KBTBD3Q8NAB2 608 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 GLMNQ92990 594 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 INO80BQ9C086 356 aaPredicted RBP8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 RAD21L1Q9H4I0 556 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 NPHS2Q9NP85 383 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 RWDD2AQ9UIY3 292 aa8.36□□□□□ -1.07
RBFOX2-205ENST00000405409 MED23Q9ULK4 1368 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 NPM3O75607 178 aaKnown RBP8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 ZSCAN20P17040 1043 aaPredicted RBP8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 CEBPAP49715 358 aaPredicted RBP8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 C16orf89Q6UX73 402 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 SFR1Q86XK3 245 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 PASD1Q8IV76 773 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 CCDC60Q8IWA6 550 aaPredicted RBP8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 ZNF335Q9H4Z2 1342 aaPredicted RBP8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 TRIM49P0CI25 452 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 TRIM49CP0CI26 452 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 PWP1Q13610 501 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 LAMC2Q13753 1193 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 TOGARAM2Q6ZUX3 1019 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 APPL2Q8NEU8 664 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 NARS2Q96I59 477 aaKnown RBP8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 THAP9Q9H5L6 903 aa8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 GPBP1L1Q9HC44 474 aaPredicted RBP8.35□□□□□ -1.07
RBFOX2-205ENST00000405409 SOS2Q07890 1332 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms