RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 TFIP11Q9UBB9 837 aaKnown RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 RWDD3Q9Y3V2 267 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 A0A087X0B3 334 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 H0YGN5 161 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 HIP1RO75146 1068 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 MYCP01106 439 aaPredicted RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 FGBP02675 491 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 STAG3L1P0CL83 205 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 ITGB8P26012 769 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 CDC25AP30304 524 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 ZNF200P98182 395 aaPredicted RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 NCBP1Q09161 790 aaKnown RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 SNW1Q13573 536 aaKnown RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 KRBA2Q6ZNG9 492 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 EPM2AIP1Q7L775 607 aaPredicted RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 FAM228AQ86W67 206 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 GPBP1Q86WP2 473 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 GPR65Q8IYL9 337 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 TDHQ8IZJ6 230 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 PIGOQ8TEQ8 1089 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 RMND1Q9NWS8 449 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 AKT3Q9Y243 479 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 TNFSF13BQ9Y275 285 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 GOLGA6L22H0YM25 854 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 MAPK13O15264 365 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 SORBS3O60504 671 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 RPS6KA5O75582 802 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 KIF20AO95235 890 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 C1RP00736 705 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 AMHP03971 560 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 CLCN3P51790 818 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 MDM2Q00987 491 aaPredicted RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 RAB30Q15771 203 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 MAP4K3Q8IVH8 894 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 CMTR2Q8IYT2 770 aaKnown RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 ASAP3Q8TDY4 903 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 TRAPPC12Q8WVT3 735 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 GSDMAQ96QA5 445 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 REEP2Q9BRK0 252 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 IFIH1Q9BYX4 1025 aaKnown RBP8.31□□□□□ -1.08
USP16-204ENST00000399976 TMEM161AQ9NX61 479 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 EXOC7Q9UPT5 735 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 PCDHA11Q9Y5I1 949 aa8.31□□□□□ -1.08
USP16-204ENST00000399976 A0A1B0GUA9 196 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 C9IYK1 514 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 USO1O60763 962 aaKnown RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 RHOBTB3O94955 611 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 MBD3O95983 291 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 NCLP19338 710 aaKnown RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 CYP2C18P33260 490 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 NLRP11P59045 1033 aaKnown RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 NOTUMQ6P988 496 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 C16orf59Q7L2K0 433 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 TMEM161BQ8NDZ6 487 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 GOLGA5Q8TBA6 731 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 CCDC47Q96A33 483 aaKnown RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 TMEM206Q9H813 350 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 PTPRHQ9HD43 1115 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 ATG2AQ2TAZ0 1938 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 A0A0U1RQF3 1178 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 MYMKA6NI61 221 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 TBCAO75347 108 aaKnown RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 NPTX2P47972 431 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 MAPK6Q16659 721 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 XKR4Q5GH76 650 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 L1TD1Q5T7N2 865 aaKnown RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 RBM43Q6ZSC3 357 aaKnown RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 USP49Q70CQ1 688 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 SLC24A5Q71RS6 500 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 ZNF598Q86UK7 904 aaKnown RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 HACE1Q8IYU2 909 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 FSIP1Q8NA03 581 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 DDX12PQ92771 950 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 ZNF689Q96CS4 500 aaPredicted RBP8.3□□□□□ -1.08
USP16-204ENST00000399976 PGBD4Q96DM1 585 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 PADI3Q9ULW8 664 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 PCDHB13Q9Y5F0 798 aa8.3□□□□□ -1.08
USP16-204ENST00000399976 POLR2DO15514 142 aaKnown RBP8.29□□□□□ -1.08
USP16-204ENST00000399976 TSPAN1O60635 241 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 MYCNP04198 464 aaPredicted RBP8.29□□□□□ -1.08
USP16-204ENST00000399976 MCF2P10911 925 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 WDR5P61964 334 aaKnown RBP8.29□□□□□ -1.08
USP16-204ENST00000399976 IGBP1P78318 339 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 DPYDQ12882 1025 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 MCM6Q14566 821 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 SLFN12LQ6IEE8 588 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 NT5DC4Q86YG4 428 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 RHPN2Q8IUC4 686 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 CD302Q8IX05 232 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 METTL13Q8N6R0 699 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 TET1Q8NFU7 2136 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 ZNF507Q8TCN5 953 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 TOP1MTQ969P6 601 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 PAGE5Q96GU1 130 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 MRPL4Q9BYD3 311 aaKnown RBP8.29□□□□□ -1.08
USP16-204ENST00000399976 NOC2LQ9Y3T9 749 aaKnown RBP8.29□□□□□ -1.08
USP16-204ENST00000399976 UMODL1Q5DID0 1318 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 GOLGA6L4A6NEF3 574 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 KLRC4O43908 158 aa8.29□□□□□ -1.08
USP16-204ENST00000399976 TRAK2O60296 914 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms