RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 DCNP07585 359 aaKnown RBP9.54□□□□□ -0.88
SCFD1-202ENST00000396629 SKIP12755 728 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 RFX1P22670 979 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 COL9A3Q14050 684 aaPredicted RBP9.54□□□□□ -0.88
SCFD1-202ENST00000396629 TTC22Q5TAA0 569 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 GLB1LQ6UWU2 654 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 TRMT1LQ7Z2T5 733 aaKnown RBP9.54□□□□□ -0.88
SCFD1-202ENST00000396629 RAB11FIP4Q86YS3 637 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 LPPQ93052 612 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 MYADMQ96S97 322 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF577Q9BSK1 485 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 GLT8D2Q9H1C3 349 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 SLC12A7Q9Y666 1083 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 FRYLO94915 3013 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 CEP250Q9BV73 2442 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 CLUHO75153 1309 aa9.54□□□□□ -0.88
SCFD1-202ENST00000396629 hCG_1984214I3L0E3 225 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF862O60290 1169 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 B4GALT3O60512 393 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 GBP2P32456 591 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 FUT2Q10981 343 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 SPECC1Q5M775 1068 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 SGMS1Q86VZ5 419 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 MAML2Q8IZL2 1156 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF713Q8N859 430 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 GPR152Q8TDT2 470 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 STAMQ92783 540 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 GCOM2Q9BZD3 368 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 RTN4Q9NQC3 1192 aaKnown RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 MAN1C1Q9NR34 630 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 NRBP2Q9NSY0 501 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 RBM8AQ9Y5S9 174 aaKnown RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 NCOR2Q9Y618 2525 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 CCDC195A0A1B0GUA6 201 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 MEIS3P2A8K0S8 358 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 CSDE1O75534 798 aaKnown RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 OATP04181 439 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 GLULP15104 373 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 SDHBP21912 280 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 CDC42EP1Q00587 391 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 SETQ01105 290 aaPredicted RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 TARBP2Q15633 366 aaKnown RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF528Q3MIS6 628 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 ZNF280BQ86YH2 543 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 NLRP7Q8WX94 980 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 TMEM175Q9BSA9 504 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 ARHGEF3Q9NR81 526 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 SLC2A4RGQ9NR83 387 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 MRPL17Q9NRX2 175 aaKnown RBP9.53□□□□□ -0.88
SCFD1-202ENST00000396629 FAM105AQ9NUU6 356 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 BARHL2Q9NY43 387 aa9.53□□□□□ -0.88
SCFD1-202ENST00000396629 POTEMA6NI47 508 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 ANHXE9PGG2 379 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 INPPL1O15357 1258 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 KINO60870 393 aaKnown RBP9.52□□□□□ -0.89
SCFD1-202ENST00000396629 DDHD2O94830 711 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 RAB27AP51159 221 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 STARD6P59095 220 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 RNASELQ05823 741 aaKnown RBP9.52□□□□□ -0.89
SCFD1-202ENST00000396629 TWF2Q6IBS0 349 aaKnown RBP9.52□□□□□ -0.89
SCFD1-202ENST00000396629 DCLRE1AQ6PJP8 1040 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 GPR161Q8N6U8 529 aaKnown RBP9.52□□□□□ -0.89
SCFD1-202ENST00000396629 PJA1Q8NG27 643 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 HDAC7Q8WUI4 952 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 SCLT1Q96NL6 688 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 HERC2P3Q9BVR0 1158 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 RBM28Q9NW13 759 aaKnown RBP9.52□□□□□ -0.89
SCFD1-202ENST00000396629 DPP7Q9UHL4 492 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 INPP5FQ9Y2H2 1132 aa9.52□□□□□ -0.89
SCFD1-202ENST00000396629 WDR64B1ANS9 1081 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 EFEMP2O95967 443 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 C1RP00736 705 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 SOD2P04179 222 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 ALDH2P05091 517 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 SSBP05455 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 LAMP2P13473 410 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 SFPQP23246 707 aaKnown RBP eCLIP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 ATXN1P54253 815 aaKnown RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 DRP2Q13474 957 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 LONRF3Q496Y0 759 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 JAKMIP3Q5VZ66 844 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 AGMOQ6ZNB7 445 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 MICU3Q86XE3 530 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 ZNF707Q96C28 371 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 PGBD4Q96DM1 585 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 RPS6KC1Q96S38 1066 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 CEP89Q96ST8 783 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 INO80BQ9C086 356 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 GBP3Q9H0R5 595 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 RXFP1Q9HBX9 757 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 TCEAL9Q9UHQ7 104 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 SSX2IPQ9Y2D8 614 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 FAN1Q9Y2M0 1017 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
SCFD1-202ENST00000396629 EPG5Q9HCE0 2579 aa9.51□□□□□ -0.89
SCFD1-202ENST00000396629 TDRD15B5MCY1 1934 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms