RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 TAPT1Q6NXT6 567 aa16.34■□□□□ 0.21
CCT4-201ENST00000394440 INTS8Q75QN2 995 aaKnown RBP16.34■□□□□ 0.21
CCT4-201ENST00000394440 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
CCT4-201ENST00000394440 COPS5Q92905 334 aa16.34■□□□□ 0.21
CCT4-201ENST00000394440 FAM167AQ96KS9 214 aa16.34■□□□□ 0.21
CCT4-201ENST00000394440 IFT74Q96LB3 600 aa16.34■□□□□ 0.21
CCT4-201ENST00000394440 KATNBL1Q9H079 304 aa16.34■□□□□ 0.21
CCT4-201ENST00000394440 RBM47A0AV96 593 aaKnown RBP16.33■□□□□ 0.2
CCT4-201ENST00000394440 LCA5LO95447 670 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 ABL1P00519 1130 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 UCHL3P15374 230 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 CNGA1P29973 690 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 ABCD1P33897 745 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
CCT4-201ENST00000394440 ASTE1Q2TB18 679 aaPredicted RBP16.33■□□□□ 0.2
CCT4-201ENST00000394440 MAMDC4Q6UXC1 1216 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 PLPPR4Q7Z2D5 763 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 RASAL3Q86YV0 1011 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 DHX37Q8IY37 1157 aaKnown RBP16.33■□□□□ 0.2
CCT4-201ENST00000394440 ZSWIM2Q8NEG5 633 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 ASAP3Q8TDY4 903 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 SLC7A3Q8WY07 619 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 IRX2Q9BZI1 471 aaPredicted RBP16.33■□□□□ 0.2
CCT4-201ENST00000394440 VTA1Q9NP79 307 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 GCNT4Q9P109 453 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 KCNG1Q9UIX4 513 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 SSU72P8A0A1W2PR75 194 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 H0YCG3 227 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 ZNF263O14978 683 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 TRIM49P0CI25 452 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 TRIM49CP0CI26 452 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 GLRA2P23416 452 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 GNG11P61952 73 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 CBWD6Q4V339 395 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 CBWD3Q5JTY5 395 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 CBWD5Q5RIA9 395 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 BBXQ8WY36 941 aaPredicted RBP16.33■□□□□ 0.2
CCT4-201ENST00000394440 TMEM143Q96AN5 459 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 SPATA33Q96N06 139 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 AZI2Q9H6S1 392 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 AIPL1Q9NZN9 384 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.2
CCT4-201ENST00000394440 NOP56O00567 594 aaKnown RBP16.32■□□□□ 0.2
CCT4-201ENST00000394440 MAFO75444 373 aaPredicted RBP16.32■□□□□ 0.2
CCT4-201ENST00000394440 NAMPTP43490 491 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 KRT83P78385 493 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 ARHGAP29Q52LW3 1261 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 TRIM50Q86XT4 487 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 FBXL18Q96ME1 805 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 MYO6Q9UM54 1294 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 ZBTB42B2RXF5 422 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 SCP2P22307 547 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 ARHGAP1Q07960 439 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 BRDTQ58F21 947 aaPredicted RBP16.32■□□□□ 0.2
CCT4-201ENST00000394440 C1orf220Q5T0J3 134 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 SFMBT2Q5VUG0 894 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 RDH13Q8NBN7 331 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 PLEKHO2Q8TD55 490 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 ATP8B4Q8TF62 1192 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 CCDC42Q96M95 316 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 HAUS4Q9H6D7 363 aa16.32■□□□□ 0.2
CCT4-201ENST00000394440 CTIFO43310 598 aaKnown RBP16.31■□□□□ 0.2
CCT4-201ENST00000394440 ADRB2P07550 413 aa16.31■□□□□ 0.2
CCT4-201ENST00000394440 EIF4A3P38919 411 aaKnown RBP16.31■□□□□ 0.2
CCT4-201ENST00000394440 KIF11P52732 1056 aa16.31■□□□□ 0.2
CCT4-201ENST00000394440 DLG4P78352 724 aa16.31■□□□□ 0.2
CCT4-201ENST00000394440 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.31■□□□□ 0.2
CCT4-201ENST00000394440 KRT13P13646 458 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 SLC26A2P50443 739 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 VAMP7P51809 220 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 JAM2P57087 298 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 ZCCHC17Q9NP64 241 aaKnown RBP16.3■□□□□ 0.2
CCT4-201ENST00000394440 AJAP1Q9UKB5 411 aaPredicted RBP16.3■□□□□ 0.2
CCT4-201ENST00000394440 IGKV6-21A0A0C4DH24 114 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 IGF2BP3O00425 579 aaKnown RBP eCLIP16.3■□□□□ 0.2
CCT4-201ENST00000394440 SNAI1O95863 264 aaPredicted RBP16.3■□□□□ 0.2
CCT4-201ENST00000394440 SERPING1P05155 500 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 MAPK4P31152 587 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 PLCB4Q15147 1175 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 PLEKHH3Q7Z736 793 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 GLG1Q92896 1179 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 MAML3Q96JK9 1138 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 MYO1AQ9UBC5 1043 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 ZSWIM8A7E2V4 1837 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 EVPLQ92817 2033 aa16.3■□□□□ 0.2
CCT4-201ENST00000394440 RBAK-RBAKDNI3L0D1 243 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 PMM2O15305 246 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 P4HA2O15460 535 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 KIF5CO60282 957 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 PIGRP01833 764 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 GARTP22102 1010 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 MYL7Q01449 175 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 PPP3CAQ08209 521 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 RAPGEF1Q13905 1077 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 SLC9C1Q4G0N8 1177 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 CBWD2Q8IUF1 395 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 LMO3Q8TAP4 145 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
CCT4-201ENST00000394440 HNRNPDLO14979 420 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms