RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ZNF576Q9H609 170 aa21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 PIN4Q9Y237 131 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-204ENST00000393546 ERLIN2O94905 339 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 MCM6Q14566 821 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 PPP2R2DQ66LE6 453 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 Q7L0L9 218 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 DEPTORQ8TB45 409 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 LRRC15Q8TF66 581 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 BSNDQ8WZ55 320 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 LARP4BQ92615 738 aaKnown RBP21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 PANK2Q9BZ23 570 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 TTYH1Q9H313 450 aaPredicted RBP21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 STK17AQ9UEE5 414 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 KCNG1Q9UIX4 513 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 PCDHA7Q9UN72 937 aa21.01■□□□□ 0.95
PDLIM7-204ENST00000393546 AXLP30530 894 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 MBTD1Q05BQ5 628 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 RAD51AP2Q09MP3 1159 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 TWF2Q6IBS0 349 aaKnown RBP21■□□□□ 0.95
PDLIM7-204ENST00000393546 GPBP1Q86WP2 473 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 CRIPAKQ8N1N5 446 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 SPATA32Q96LK8 384 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 FAM161BQ96MY7 647 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 ELAC1Q9H777 363 aaKnown RBP21■□□□□ 0.95
PDLIM7-204ENST00000393546 C17orf75Q9HAS0 396 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 AGPAT5Q9NUQ2 364 aa21■□□□□ 0.95
PDLIM7-204ENST00000393546 A0A0U1RQF3 1178 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 LCHNA4D1U4 455 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 DGKIO75912 1065 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 KRT18P05783 430 aaKnown RBP20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 SKIP12755 728 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 PEX3P56589 373 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 ARSHQ5FYA8 562 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 AXDND1Q5T1B0 1012 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 CDCA2Q69YH5 1023 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 DAW1Q8N136 415 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 LEO1Q8WVC0 666 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 TRAIPQ9BWF2 469 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 PRMT7Q9NVM4 692 aaPredicted RBP20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 TMEM161AQ9NX61 479 aa20.99■□□□□ 0.95
PDLIM7-204ENST00000393546 CCDC169A6NNP5 214 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 SFI1A8K8P3 1242 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 STAT6P42226 847 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 EFNA5P52803 228 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 TAP1Q03518 808 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 MAPK7Q13164 816 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 DMP1Q13316 513 aaPredicted RBP20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 SHC4Q6S5L8 630 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 SV2BQ7L1I2 683 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 ECHDC2Q86YB7 292 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 SP7Q8TDD2 431 aaPredicted RBP20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 SCAND2PQ9GZW5 306 aaPredicted RBP20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 FAM13BQ9NYF5 915 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 ODF2LQ9ULJ1 636 aa20.98■□□□□ 0.95
PDLIM7-204ENST00000393546 NPHP3-ACAD11A0A0J9YXS1 232 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 TSPAN1O60635 241 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 EOMESO95936 686 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 HOXA11P31270 313 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 NPTX2P47972 431 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 SMTNP53814 917 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 MAPK6Q16659 721 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 AMHR2Q16671 573 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 FAM187BQ17R55 369 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 NOTUMQ6P988 496 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 FIBCD1Q8N539 461 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 PDILTQ8N807 584 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 ZNF689Q96CS4 500 aaPredicted RBP20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 CHAMP1Q96JM3 812 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 PRIMPOLQ96LW4 560 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 FZD8Q9H461 694 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 KMT5AQ9NQR1 393 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 MTMR10Q9NXD2 777 aa20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
PDLIM7-204ENST00000393546 LINC01553A4QN01 128 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 K7ERI5 159 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 HOXA2O43364 376 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 PLS3P13797 630 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 RAB27AP51159 221 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 BTG3Q14201 252 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 NAALADL2Q58DX5 795 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 PPP4R3CPQ6ZMV5 832 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 RNF169Q8NCN4 708 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 SPIRE2Q8WWL2 714 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 CCDC51Q96ER9 411 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 CPB2Q96IY4 423 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 TGS1Q96RS0 853 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 NTPCRQ9BSD7 190 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 FAM105AQ9NUU6 356 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 LARSQ9P2J5 1176 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 CIZ1Q9ULV3 898 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 MYO9BQ13459 2157 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 TCHHQ07283 1943 aa20.96■□□□□ 0.95
PDLIM7-204ENST00000393546 A0A087X0B3 334 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 ACKR2O00590 384 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 ZNF623O75123 536 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 FAM13AO94988 1023 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 ARHGEF15O94989 841 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 PRKCBP05771 671 aa20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 ARF4P18085 180 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-204ENST00000393546 LIG1P18858 919 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms