RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 LCHNA4D1U4 455 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 SFI1A8K8P3 1242 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 PPP2R5AQ15172 486 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 AXDND1Q5T1B0 1012 aaPredicted RBP21.44■■□□□ 1.02
GTF3A-201ENST00000381140 TWF2Q6IBS0 349 aaKnown RBP21.44■■□□□ 1.02
GTF3A-201ENST00000381140 SHC4Q6S5L8 630 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 ZBTB8OSQ8IWT0 167 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 LEO1Q8WVC0 666 aaPredicted RBP21.44■■□□□ 1.02
GTF3A-201ENST00000381140 DRC1Q96MC2 740 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 KIFC3Q9BVG8 833 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 SLC28A3Q9HAS3 691 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 STK17AQ9UEE5 414 aa21.44■■□□□ 1.02
GTF3A-201ENST00000381140 FNDC1Q4ZHG4 1894 aaPredicted RBP21.43■■□□□ 1.02
GTF3A-201ENST00000381140 CCDC169A6NNP5 214 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 GUCY2CP25092 1073 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 NAMPTP43490 491 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 SARSP49591 514 aaKnown RBP21.43■■□□□ 1.02
GTF3A-201ENST00000381140 PEX3P56589 373 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 MBTD1Q05BQ5 628 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 PPP2R2DQ66LE6 453 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 CCDC73Q6ZRK6 1079 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 SLC24A5Q71RS6 500 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 DAW1Q8N136 415 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 RNF169Q8NCN4 708 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 RAD9AQ99638 391 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 PCDHB7Q9Y5E2 793 aa21.43■■□□□ 1.02
GTF3A-201ENST00000381140 C9IYK1 514 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 STAG3L1P0CL83 205 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 POU5F1BQ06416 359 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 MAPK7Q13164 816 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 ARSHQ5FYA8 562 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 NPAS4Q8IUM7 802 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 DEFB123Q8N688 67 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 ZHX3Q9H4I2 956 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 GDPD2Q9HCC8 539 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 AGPAT5Q9NUQ2 364 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 DACT1Q9NYF0 836 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 INSL6Q9Y581 213 aa21.42■■□□□ 1.02
GTF3A-201ENST00000381140 TSPAN1O60635 241 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 GATMP50440 423 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 DMP1Q13316 513 aaPredicted RBP21.41■■□□□ 1.02
GTF3A-201ENST00000381140 NFKBIBQ15653 356 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 TMEM132AQ24JP5 1023 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 IFNLR1Q8IU57 520 aaPredicted RBP21.41■■□□□ 1.02
GTF3A-201ENST00000381140 DHX58Q96C10 678 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 CPB2Q96IY4 423 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 REEP2Q9BRK0 252 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 TIPINQ9BVW5 301 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 C2orf40Q9H1Z8 148 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 TTYH1Q9H313 450 aaPredicted RBP21.41■■□□□ 1.02
GTF3A-201ENST00000381140 CHST12Q9NRB3 414 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 FAM13BQ9NYF5 915 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 KCND2Q9NZV8 630 aa21.41■■□□□ 1.02
GTF3A-201ENST00000381140 KIAA1671Q9BY89 1806 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 B4GALT5O43286 388 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 ARHGEF15O94989 841 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 MCM4P33991 863 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 NCBP1Q09161 790 aaKnown RBP21.4■■□□□ 1.02
GTF3A-201ENST00000381140 LONRF3Q496Y0 759 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 PAN2Q504Q3 1202 aaKnown RBP21.4■■□□□ 1.02
GTF3A-201ENST00000381140 NAALADL2Q58DX5 795 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 CDCA2Q69YH5 1023 aaPredicted RBP21.4■■□□□ 1.02
GTF3A-201ENST00000381140 SV2BQ7L1I2 683 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 NFKBIZQ9BYH8 718 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 SCAND2PQ9GZW5 306 aaPredicted RBP21.4■■□□□ 1.02
GTF3A-201ENST00000381140 ZNF576Q9H609 170 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 CERS4Q9HA82 394 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 KMT5AQ9NQR1 393 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 ADGRA3Q8IWK6 1321 aa21.4■■□□□ 1.02
GTF3A-201ENST00000381140 SLC16A4O15374 487 aa21.39■■□□□ 1.02
GTF3A-201ENST00000381140 FAM13AO94988 1023 aa21.39■■□□□ 1.02
GTF3A-201ENST00000381140 NPTX2P47972 431 aa21.39■■□□□ 1.02
GTF3A-201ENST00000381140 HTRA4P83105 476 aaPredicted RBP21.39■■□□□ 1.02
GTF3A-201ENST00000381140 GPR153Q6NV75 609 aa21.39■■□□□ 1.02
GTF3A-201ENST00000381140 FAM43BQ6ZT52 329 aaPredicted RBP21.39■■□□□ 1.02
GTF3A-201ENST00000381140 DYMQ7RTS9 669 aa21.39■■□□□ 1.02
GTF3A-201ENST00000381140 ECHDC2Q86YB7 292 aa21.39■■□□□ 1.02
GTF3A-201ENST00000381140 SEMA6BQ9H3T3 888 aa21.39■■□□□ 1.02
GTF3A-201ENST00000381140 TBCAO75347 108 aaKnown RBP21.38■■□□□ 1.01
GTF3A-201ENST00000381140 PRKCBP05771 671 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 FGFR1P11362 822 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 HOXA11P31270 313 aaPredicted RBP21.38■■□□□ 1.01
GTF3A-201ENST00000381140 MAPK6Q16659 721 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 RESP18Q5W5W9 173 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 SPRED2Q7Z698 418 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 CDR2LQ86X02 465 aaPredicted RBP21.38■■□□□ 1.01
GTF3A-201ENST00000381140 STAMQ92783 540 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 PRMT7Q9NVM4 692 aaPredicted RBP21.38■■□□□ 1.01
GTF3A-201ENST00000381140 RNF216Q9NWF9 866 aaPredicted RBP21.38■■□□□ 1.01
GTF3A-201ENST00000381140 TMEM161AQ9NX61 479 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 MTUS1Q9ULD2 1270 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 USP20Q9Y2K6 914 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 RALGAPA2Q2PPJ7 1873 aa21.38■■□□□ 1.01
GTF3A-201ENST00000381140 LINC01553A4QN01 128 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 POLR2DO15514 142 aaKnown RBP21.37■■□□□ 1.01
GTF3A-201ENST00000381140 DGKIO75912 1065 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 PLS3P13797 630 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 ARF4P18085 180 aaPredicted RBP21.37■■□□□ 1.01
GTF3A-201ENST00000381140 EFNA5P52803 228 aa21.37■■□□□ 1.01
GTF3A-201ENST00000381140 FAM189BP81408 668 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms