RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 CC2D2BQ6DHV5 1058 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 BTNL9Q6UXG8 535 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ZNF333Q96JL9 665 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 EDEM3Q9BZQ6 932 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 MTFR1LQ9H019 292 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ALG13Q9NP73 1137 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 NDUFA13Q9P0J0 144 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 NFS1Q9Y697 457 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 CDC42BPGQ6DT37 1551 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 SPECC1L-ADORA2AF8WAN1 911 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 OR52Z1P0C646 297 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ALADP13716 330 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 CHRNA3P32297 505 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 LRRC63Q05C16 580 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ECHDC2Q86YB7 292 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 C4orf33Q8N1A6 199 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 ICA1LQ8NDH6 482 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 FAM81BQ96LP2 452 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 DUSP9Q99956 384 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 THTPAQ9BU02 230 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 MAF1Q9H063 256 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 PPARGC1AQ9UBK2 798 aaKnown RBP11.7□□□□□ -0.54
USP6NL-202ENST00000379237 SCINQ9Y6U3 715 aa11.7□□□□□ -0.54
USP6NL-202ENST00000379237 A6NJR5 290 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 I3L4J1 428 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 NOL3O60936 208 aaKnown RBP11.69□□□□□ -0.54
USP6NL-202ENST00000379237 ITGA2BP08514 1039 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 SLC5A1P13866 664 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 HSPA6P17066 643 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 KCNJ1P48048 391 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 RTP1P59025 263 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 BPIFB4P59827 614 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 KDSRQ06136 332 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 OVGP1Q12889 678 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 AUHQ13825 339 aaKnown RBP11.69□□□□□ -0.54
USP6NL-202ENST00000379237 SGO2Q562F6 1265 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 RABGAP1LQ5R372 815 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 FAM26FQ5R3K3 315 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 EXOC3L1Q86VI1 746 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 CCDC124Q96CT7 223 aaKnown RBP11.69□□□□□ -0.54
USP6NL-202ENST00000379237 TRIM9Q9C026 710 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 LRMDAQ9H2I8 198 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 AIPL1Q9NZN9 384 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 PHF24Q9UPV7 400 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 TRIM43BA6NCK2 446 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 PHBP35232 272 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 MTTPP55157 894 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 RNF43Q68DV7 783 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 TMTC3Q6ZXV5 915 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 CKAP2Q8WWK9 683 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 C18orf8Q96DM3 657 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 ZSCAN10Q96SZ4 725 aaPredicted RBP11.69□□□□□ -0.54
USP6NL-202ENST00000379237 DRC3Q9H069 523 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 MAGEF1Q9HAY2 307 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 HDAC9Q9UKV0 1011 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 ZC3H13Q5T200 1668 aaKnown RBP11.69□□□□□ -0.54
USP6NL-202ENST00000379237 B2RBV5 119 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 RGS2P41220 211 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 PTK2Q05397 1052 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 ASPHQ12797 758 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 MAPK7Q13164 816 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 C16orf87Q6PH81 154 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 MKNK2Q9HBH9 465 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 CTNNAL1Q9UBT7 734 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 TDRKHQ9Y2W6 561 aaKnown RBP11.69□□□□□ -0.54
USP6NL-202ENST00000379237 PCDHB13Q9Y5F0 798 aa11.69□□□□□ -0.54
USP6NL-202ENST00000379237 CDH16O75309 829 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 STK10O94804 968 aaKnown RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 PPIDQ08752 370 aaKnown RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 MTFR1Q15390 333 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 TRIP10Q15642 601 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 TMCO4Q5TGY1 634 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 PLBD2Q8NHP8 589 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 TPCN2Q8NHX9 752 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 SDR42E1Q8WUS8 393 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 PPP2R3CQ969Q6 453 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 MTBPQ96DY7 904 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 NSL1Q96IY1 281 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 TIPINQ9BVW5 301 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 NDEL1Q9GZM8 345 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 JCADQ9P266 1359 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 H3BRJ5 948 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 RIPK2O43353 540 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 CLPTM1O96005 669 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 ENO1P06733 434 aaKnown RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 PYGMP11217 842 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 CTNNA2P26232 953 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 PPP2R5CQ13362 524 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 GSTA3Q16772 222 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 HP1BP3Q5SSJ5 553 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 SCUBE1Q8IWY4 988 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 ZBTB8BQ8NAP8 495 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 C9orf72Q96LT7 481 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 ANKRD2Q9GZV1 360 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 RIC8AQ9NPQ8 531 aa11.68□□□□□ -0.54
USP6NL-202ENST00000379237 FAM217BQ9NTX9 383 aaPredicted RBP11.68□□□□□ -0.54
USP6NL-202ENST00000379237 ADGRB3O60242 1522 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms