RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 SYN2Q92777 582 aaPredicted RBP20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 AP3M2P53677 418 aa20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 SLC10A5Q5PT55 438 aa20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 NLRP7Q8WX94 980 aa20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 LRRC1Q9BTT6 524 aa20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 NGRNQ9NPE2 291 aaKnown RBP20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 FOXP2O15409 715 aa20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 MAGOHP61326 146 aaKnown RBP20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 RNPC3Q96LT9 517 aaKnown RBP20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 AP5M1Q9H0R1 490 aa20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 Q9H521 79 aa20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 ZHX2Q9Y6X8 837 aa20.9■□□□□ 0.94
TGFBR1-201ENST00000374990 TNFAIP2Q03169 654 aa20.89■□□□□ 0.94
TGFBR1-201ENST00000374990 CCNI2Q6ZMN8 369 aaPredicted RBP20.89■□□□□ 0.94
TGFBR1-201ENST00000374990 DNAAF3Q8N9W5 541 aa20.89■□□□□ 0.94
TGFBR1-201ENST00000374990 SYNJ2BP-COX16A0A087WUM0 186 aa20.89■□□□□ 0.94
TGFBR1-201ENST00000374990 PPP2R5CQ13362 524 aa20.89■□□□□ 0.94
TGFBR1-201ENST00000374990 HNRNPLLQ8WVV9 542 aaKnown RBP20.89■□□□□ 0.94
TGFBR1-201ENST00000374990 PITPNM3Q9BZ71 974 aa20.89■□□□□ 0.94
TGFBR1-201ENST00000374990 COX16Q9P0S2 106 aa20.89■□□□□ 0.94
TGFBR1-201ENST00000374990 NMT1P30419 496 aaKnown RBP20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 NBPF9Q3BBW0 867 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 RSRC2Q7L4I2 434 aaKnown RBP20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 TRIM59Q8IWR1 403 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 AGPAT1Q99943 283 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 DDX23Q9BUQ8 820 aaKnown RBP20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 SAYSD1Q9NPB0 183 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 CPSF2Q9P2I0 782 aaKnown RBP20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 ZNF211Q13398 564 aaPredicted RBP20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 NXNQ6DKJ4 435 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 BBS5Q8N3I7 341 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 LPAR1Q92633 364 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 MAPK13O15264 365 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 KRT7P08729 469 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 REXO1L1PQ8IX06 675 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 GBP5Q96PP8 586 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 PNMA3Q9UL41 463 aa20.89■□□□□ 0.93
TGFBR1-201ENST00000374990 BAG2O95816 211 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 SEC23AQ15436 765 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 SCARA5Q6ZMJ2 495 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 LINC00116Q8NCU8 138 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 ELAC2Q9BQ52 826 aaKnown RBP20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 APEX2Q9UBZ4 518 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 WRNIP1Q96S55 665 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 REEP2Q9BRK0 252 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 JMJD4Q9H9V9 463 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 PACSIN2Q9UNF0 486 aaPredicted RBP20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 ECE1P42892 770 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 NAB2Q15742 525 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 FIGNQ5HY92 759 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 CCDC137Q6PK04 289 aaKnown RBP20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 MTRQ99707 1265 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 ACAD9Q9H845 621 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 UVRAGQ9P2Y5 699 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 KPNA2P52292 529 aaKnown RBP20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 ZNF699Q32M78 642 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 ZNF746Q6NUN9 644 aaPredicted RBP20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 GPD1LQ8N335 351 aa20.88■□□□□ 0.93
TGFBR1-201ENST00000374990 SWSAP1Q6NVH7 229 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 KLC2Q9H0B6 622 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 RASA4BC9J798 803 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 RASA4O43374 803 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 FMO5P49326 533 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 GSDMBQ8TAX9 411 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 FAM193BQ96PV7 902 aaPredicted RBP20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 JCADQ9P266 1359 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 RTN2O75298 545 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 DBN1Q16643 649 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 CDC42EP5Q6NZY7 148 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 PDCD7Q8N8D1 485 aaKnown RBP20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 HEMGNQ9BXL5 484 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 TOPORSQ9NS56 1045 aaPredicted RBP20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 ASNSD1Q9NWL6 643 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 IP6K2Q9UHH9 426 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 DCTN3O75935 186 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 GUCY2CP25092 1073 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 PHKA2P46019 1235 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 ZNF302Q9NR11 478 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 DNAJC17Q9NVM6 304 aaKnown RBP20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 AMACRQ9UHK6 382 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 TLK1Q9UKI8 766 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 KDM6AO15550 1401 aaPredicted RBP20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 TOB1P50616 345 aaPredicted RBP20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 GALCP54803 685 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 ZNF394Q53GI3 561 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 SIX6OS1Q8N1H7 587 aa20.87■□□□□ 0.93
TGFBR1-201ENST00000374990 DGAT1O75907 488 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 GSTA1P08263 222 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 GSTA2P09210 222 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 FAM133BQ5BKY9 247 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 ATG16L1Q676U5 607 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 METTL23Q86XA0 190 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 FBXO41Q8TF61 875 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 RIT2Q99578 217 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 FBXL5Q9UKA1 691 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 KBTBD4Q9NVX7 518 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 ARHGEF28Q8N1W1 1705 aaKnown RBP20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 KRT38O76015 456 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 PRR12Q9ULL5 1215 aa20.86■□□□□ 0.93
TGFBR1-201ENST00000374990 ATP5HO75947 161 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms