RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MCF2L2Q86YR7 1114 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 C12orf56Q8IXR9 622 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 RFFLQ8WZ73 363 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 STRA6Q9BX79 667 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 FAM107BQ9H098 131 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 GGA3Q9NZ52 723 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 DBR1Q9UK59 544 aaKnown RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 PNMA2Q9UL42 364 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 TTC7AQ9ULT0 858 aaPredicted RBP15.14■□□□□ 0.01
HMGCL-203ENST00000374490 NFU1Q9UMS0 254 aa15.14■□□□□ 0.01
HMGCL-203ENST00000374490 TRPM7Q96QT4 1865 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 RPTORQ8N122 1335 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 LOXHD1Q8IVV2 1947 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 SFI1A8K8P3 1242 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 IPO5O00410 1097 aaKnown RBP15.13■□□□□ 0.01
HMGCL-203ENST00000374490 MAPK13O15264 365 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 RAD51CO43502 376 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 EVI5O60447 810 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 PPP1R37O75864 691 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 CARSP49589 748 aaKnown RBP15.13■□□□□ 0.01
HMGCL-203ENST00000374490 DNA2P51530 1060 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 ZNF157P51786 506 aaPredicted RBP15.13■□□□□ 0.01
HMGCL-203ENST00000374490 GHRHRQ02643 423 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 KCNA1Q09470 495 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 DGKZQ13574 1117 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 DRAP1Q14919 205 aaPredicted RBP15.13■□□□□ 0.01
HMGCL-203ENST00000374490 KIAA1755Q5JYT7 1200 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 LRIG3Q6UXM1 1119 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 SRLQ86TD4 932 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 SYCP3Q8IZU3 236 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 SLC17A8Q8NDX2 589 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 CASKIN2Q8WXE0 1202 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 LRRC45Q96CN5 670 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 CCDC43Q96MW1 224 aaKnown RBP15.13■□□□□ 0.01
HMGCL-203ENST00000374490 LXNQ9BS40 222 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 CAPS2Q9BXY5 557 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 LARSQ9P2J5 1176 aaKnown RBP15.13■□□□□ 0.01
HMGCL-203ENST00000374490 APEX2Q9UBZ4 518 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 AJAP1Q9UKB5 411 aaPredicted RBP15.13■□□□□ 0.01
HMGCL-203ENST00000374490 AMFRQ9UKV5 643 aa15.13■□□□□ 0.01
HMGCL-203ENST00000374490 PACSIN2Q9UNF0 486 aaPredicted RBP15.13■□□□□ 0.01
HMGCL-203ENST00000374490 DOCK1Q14185 1865 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 TMCO5BA8MYB1 307 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 BHMG1C9JSJ3 638 aaPredicted RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 EXOC3O60645 756 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 ICAM1P05362 532 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 P4HBP07237 508 aaKnown RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 CYP2J2P51589 502 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 GALCP54803 685 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 BFSP1Q12934 665 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 KIF22Q14807 665 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 ZC2HC1CQ53FD0 456 aaPredicted RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 INTS8Q75QN2 995 aaKnown RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 MIER3Q7Z3K6 550 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 IQCKQ8N0W5 287 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 CCDC26Q8TAB7 109 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 LNX1Q8TBB1 728 aaPredicted RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 IFT81Q8WYA0 676 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 CTNNBL1Q8WYA6 563 aaPredicted RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 HES6Q96HZ4 224 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 ZIM3Q96PE6 472 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 ACCSQ96QU6 501 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 ZIC5Q96T25 663 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 NAP1L3Q99457 506 aaPredicted RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
HMGCL-203ENST00000374490 MAP3K20Q9NYL2 800 aaKnown RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 RRP15Q9Y3B9 282 aaKnown RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
HMGCL-203ENST00000374490 PHF20L1A8MW92 1017 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 FAM155AB1AL88 458 aaPredicted RBP15.11■□□□□ 0.01
HMGCL-203ENST00000374490 CTNND1O60716 968 aaKnown RBP15.11■□□□□ 0.01
HMGCL-203ENST00000374490 HIP1RO75146 1068 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 LYPLA2O95372 231 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 ZBTB48P10074 688 aaPredicted RBP15.11■□□□□ 0.01
HMGCL-203ENST00000374490 ARP10275 920 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 TNFAIP3P21580 790 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 RGS19P49795 217 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 MTMR3Q13615 1198 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 ZYXQ15942 572 aaKnown RBP15.11■□□□□ 0.01
HMGCL-203ENST00000374490 PADI6Q6TGC4 694 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 MAATS1Q7Z4T9 603 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 DAAM2Q86T65 1068 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 NT5DC3Q86UY8 548 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 KLHL7Q8IXQ5 586 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 METTL13Q8N6R0 699 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 IWS1Q96ST2 819 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 SYT11Q9BT88 431 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 ZNF341Q9BYN7 854 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 PPP2R3BQ9Y5P8 575 aa15.11■□□□□ 0.01
HMGCL-203ENST00000374490 RBBP6Q7Z6E9 1792 aaKnown RBP15.11■□□□□ 0.01
HMGCL-203ENST00000374490 K7ENM7 598 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 IRAK1P51617 712 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 HADHBP55084 474 aaKnown RBP15.1■□□□□ 0.01
HMGCL-203ENST00000374490 MRPS25P82663 173 aaKnown RBP15.1■□□□□ 0.01
HMGCL-203ENST00000374490 MAPK7Q13164 816 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 TCEAL1Q15170 157 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 NBPF12Q5TAG4 269 aaPredicted RBP15.1■□□□□ 0.01
HMGCL-203ENST00000374490 EMC10Q5UCC4 262 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 GJB7Q6PEY0 223 aa15.1■□□□□ 0.01
HMGCL-203ENST00000374490 ST6GALNAC4Q9H4F1 302 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms