RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 MTMR1Q13613 665 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 TRIM4Q9C037 500 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 SKIP12755 728 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 POLD1P28340 1107 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 FMO5P49326 533 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 SH3BGRP55822 239 aaPredicted RBP18.63■□□□□ 0.57
PTPRU-202ENST00000373779 SEPT10Q9P0V9 454 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 TFAMQ00059 246 aaKnown RBP18.63■□□□□ 0.57
PTPRU-202ENST00000373779 KRT17Q04695 432 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 KRT39Q6A163 491 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 XPO6Q96QU8 1125 aaKnown RBP18.63■□□□□ 0.57
PTPRU-202ENST00000373779 Q9H521 79 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 TPX2Q9ULW0 747 aaKnown RBP18.63■□□□□ 0.57
PTPRU-202ENST00000373779 P4HBP07237 508 aaKnown RBP18.63■□□□□ 0.57
PTPRU-202ENST00000373779 PDE1BQ01064 536 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 ARHGAP27Q6ZUM4 889 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 SLC12A2P55011 1212 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 KLHDC7AQ5VTJ3 777 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 AP1ARQ63HQ0 302 aa18.63■□□□□ 0.57
PTPRU-202ENST00000373779 PMS1P54277 932 aaKnown RBP18.62■□□□□ 0.57
PTPRU-202ENST00000373779 C11orf70Q9BRQ4 267 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 MSTO1Q9BUK6 570 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 SEMA6BQ9H3T3 888 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 SCOCQ9UIL1 159 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 CASQ2O14958 399 aaPredicted RBP18.62■□□□□ 0.57
PTPRU-202ENST00000373779 TBX3O15119 743 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 GMNNO75496 209 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 NXNQ6DKJ4 435 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 ADGRA1Q86SQ6 560 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 CLEC10AQ8IUN9 316 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 PASD1Q8IV76 773 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 CCT6BQ92526 530 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 CCDC97Q96F63 343 aaPredicted RBP18.62■□□□□ 0.57
PTPRU-202ENST00000373779 SUCLA2Q9P2R7 463 aaPredicted RBP18.62■□□□□ 0.57
PTPRU-202ENST00000373779 DAGLAQ9Y4D2 1042 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 TTLL3Q9Y4R7 772 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 FAM205AQ6ZU69 1335 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 ARL4CP56559 192 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 TFDP1Q14186 410 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 MAP7Q14244 749 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 MIGA2Q7L4E1 593 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 GOLPH3Q9H4A6 298 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 HSD17B3P37058 310 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 CCDC125Q86Z20 511 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 TRIM55Q9BYV6 548 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 NXF1Q9UBU9 619 aaKnown RBP18.62■□□□□ 0.57
PTPRU-202ENST00000373779 PITPNM2Q9BZ72 1349 aa18.62■□□□□ 0.57
PTPRU-202ENST00000373779 MAP3K7O43318 606 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 SLC37A4O43826 429 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 EZH2Q15910 746 aaKnown RBP18.61■□□□□ 0.57
PTPRU-202ENST00000373779 SLFN12LQ6IEE8 588 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 ERICH1Q86X53 443 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 ADPGKQ9BRR6 497 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 INTS13Q9NVM9 706 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 MYO5BQ9ULV0 1848 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 A0A0G2JND7 137 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 LMNAP02545 664 aaKnown RBP18.61■□□□□ 0.57
PTPRU-202ENST00000373779 ARL8AQ96BM9 186 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 CFAP36Q96G28 342 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 LRRC37BQ96QE4 947 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 ZWILCHQ9H900 591 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 PALM3A6NDB9 673 aaPredicted RBP18.61■□□□□ 0.57
PTPRU-202ENST00000373779 MYBL1P10243 752 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 MYO1EQ12965 1108 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 MKRN3Q13064 507 aaKnown RBP18.61■□□□□ 0.57
PTPRU-202ENST00000373779 ZBTB33Q86T24 672 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 MAML1Q92585 1016 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 CELF4Q9BZC1 486 aaKnown RBP18.61■□□□□ 0.57
PTPRU-202ENST00000373779 TBC1D22BQ9NU19 505 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 ARHGAP20Q9P2F6 1191 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 DMGDHQ9UI17 866 aaKnown RBP18.61■□□□□ 0.57
PTPRU-202ENST00000373779 TMEM253P0C7T8 217 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 QARSP47897 775 aaKnown RBP18.61■□□□□ 0.57
PTPRU-202ENST00000373779 RNF25Q96BH1 459 aaPredicted RBP18.61■□□□□ 0.57
PTPRU-202ENST00000373779 NUF2Q9BZD4 464 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 KIAA1586Q9HCI6 787 aa18.61■□□□□ 0.57
PTPRU-202ENST00000373779 A0A087X0T9 212 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 FAM228BP0C875 321 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 PSMA2P25787 234 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 EPHA7Q15375 998 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 JAMLQ86YT9 394 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 JMJD4Q9H9V9 463 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 ZFP69BQ9UJL9 534 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 DENND3A2RUS2 1198 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 K7ERI5 159 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 SYT2Q8N9I0 419 aaPredicted RBP18.6■□□□□ 0.57
PTPRU-202ENST00000373779 FAM213AQ9BRX8 229 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 PAGR1Q9BTK6 254 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 ETNK1Q9HBU6 452 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 TTC7AQ9ULT0 858 aaPredicted RBP18.6■□□□□ 0.57
PTPRU-202ENST00000373779 WDR64B1ANS9 1081 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 SAAL1Q96ER3 474 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 ANGPTL2Q9UKU9 493 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 TCP11X1B4DZS4 312 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 BMP6P22004 513 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 SCARA5Q6ZMJ2 495 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 PDZD4Q76G19 769 aaPredicted RBP18.6■□□□□ 0.57
PTPRU-202ENST00000373779 PCGF5Q86SE9 256 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 NME8Q8N427 588 aa18.6■□□□□ 0.57
PTPRU-202ENST00000373779 GRAMD1AQ96CP6 724 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms