RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 HOXA11P31270 313 aaPredicted RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 DNM2P50570 870 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 FOSBP53539 338 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 C1QBPQ07021 282 aaKnown RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 ST3GAL1Q11201 340 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 CTTNQ14247 550 aaKnown RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 ME3Q16798 604 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 UBXN11Q5T124 520 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 TWF2Q6IBS0 349 aaKnown RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 ZNF410Q86VK4 478 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 ZNF280BQ86YH2 543 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 FAM177A1Q8N128 213 aaPredicted RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 MRPL43Q8N983 215 aaKnown RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 PRPF31Q8WWY3 499 aaKnown RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 DYDC2Q96IM9 177 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 CEP170P1Q96L14 293 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 FBXL18Q96ME1 805 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 FAM20AQ96MK3 541 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 TRAIPQ9BWF2 469 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 NGRNQ9NPE2 291 aaKnown RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 TBC1D13Q9NVG8 400 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 DACT1Q9NYF0 836 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 ORC3Q9UBD5 711 aaPredicted RBP14.74□□□□□ -0.05
RPF1-201ENST00000370654 INPP5FQ9Y2H2 1132 aa14.74□□□□□ -0.05
RPF1-201ENST00000370654 ZC3H11AO75152 810 aaKnown RBP eCLIP14.73□□□□□ -0.05
RPF1-201ENST00000370654 P4HBP07237 508 aaKnown RBP14.73□□□□□ -0.05
RPF1-201ENST00000370654 SRGAP2CP0DJJ0 459 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 SFPQP23246 707 aaKnown RBP eCLIP14.73□□□□□ -0.05
RPF1-201ENST00000370654 PPM1AP35813 382 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 CYP4A11Q02928 519 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 KRT17Q04695 432 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 EPHA7Q15375 998 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 NCAPH2Q6IBW4 605 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 AGMOQ6ZNB7 445 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 CATSPER4Q7RTX7 472 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 C12orf76Q8N812 135 aaPredicted RBP14.73□□□□□ -0.05
RPF1-201ENST00000370654 LXNQ9BS40 222 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 XPNPEP1Q9NQW7 623 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 COL4A3BPQ9Y5P4 624 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 HCFC2Q9Y5Z7 792 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 ZNF318Q5VUA4 2279 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 JAK2O60674 1132 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 CDKL5O76039 1030 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 DDHD2O94830 711 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 SLITRK3O94933 977 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 CXCL14O95715 111 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 GALTP07902 379 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 YWHABP31946 246 aaKnown RBP14.73□□□□□ -0.05
RPF1-201ENST00000370654 SLC11A1P49279 550 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 ZXDAP98168 799 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 LAMTOR4Q0VGL1 99 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 NOMO2Q5JPE7 1267 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 IER5LQ5T953 404 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 TRIM67Q6ZTA4 783 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 C4orf19Q8IY42 314 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 VPS52Q8N1B4 723 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 GBP3Q9H0R5 595 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 ZBP1Q9H171 429 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 AGPAT5Q9NUQ2 364 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 PCDHB2Q9Y5E7 798 aa14.73□□□□□ -0.05
RPF1-201ENST00000370654 WDFY4Q6ZS81 3184 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 TMEM221A6NGB7 291 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 M0R296 226 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 ZNF623O75123 536 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 SEC24BO95487 1268 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 GCFC2P16383 781 aaKnown RBP14.72□□□□□ -0.05
RPF1-201ENST00000370654 EPCAMP16422 314 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 ALDH7A1P49419 539 aaKnown RBP14.72□□□□□ -0.05
RPF1-201ENST00000370654 POLGP54098 1239 aaPredicted RBP14.72□□□□□ -0.05
RPF1-201ENST00000370654 CDC42EP1Q00587 391 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 SMC1AQ14683 1233 aaKnown RBP14.72□□□□□ -0.05
RPF1-201ENST00000370654 EMC2Q15006 297 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 ALYREFQ86V81 257 aaKnown RBP14.72□□□□□ -0.05
RPF1-201ENST00000370654 NSUN7Q8NE18 718 aaKnown RBP14.72□□□□□ -0.05
RPF1-201ENST00000370654 IGSF21Q96ID5 467 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 MRPL9Q9BYD2 267 aaKnown RBP14.72□□□□□ -0.05
RPF1-201ENST00000370654 POMKQ9H5K3 350 aa14.72□□□□□ -0.05
RPF1-201ENST00000370654 ARID2Q68CP9 1835 aa14.71□□□□□ -0.05
RPF1-201ENST00000370654 BTBD18B2RXH4 712 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 TBX3O15119 743 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 CA8P35219 290 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 XKR9Q5GH70 373 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 MRPL10Q7Z7H8 261 aaKnown RBP14.71□□□□□ -0.06
RPF1-201ENST00000370654 FERMT3Q86UX7 667 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 TPH2Q8IWU9 490 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 SMG8Q8ND04 991 aaKnown RBP14.71□□□□□ -0.06
RPF1-201ENST00000370654 SLC7A3Q8WY07 619 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 GTF3C6Q969F1 213 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 EIF2AQ9BY44 585 aaKnown RBP14.71□□□□□ -0.06
RPF1-201ENST00000370654 INO80BQ9C086 356 aaPredicted RBP14.71□□□□□ -0.06
RPF1-201ENST00000370654 SMOC2Q9H3U7 446 aa14.71□□□□□ -0.06
RPF1-201ENST00000370654 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.7□□□□□ -0.06
RPF1-201ENST00000370654 KRT2P35908 639 aa14.7□□□□□ -0.06
RPF1-201ENST00000370654 NHLH1Q02575 133 aa14.7□□□□□ -0.06
RPF1-201ENST00000370654 GLB1LQ6UWU2 654 aa14.7□□□□□ -0.06
RPF1-201ENST00000370654 DDX53Q86TM3 631 aaKnown RBP14.7□□□□□ -0.06
RPF1-201ENST00000370654 RNF149Q8NC42 400 aa14.7□□□□□ -0.06
RPF1-201ENST00000370654 PRSS33Q8NF86 280 aa14.7□□□□□ -0.06
RPF1-201ENST00000370654 ASAP3Q8TDY4 903 aa14.7□□□□□ -0.06
RPF1-201ENST00000370654 SLC22A17Q8WUG5 538 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms