RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PTGIRP43119 386 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 APBB1IPQ7Z5R6 666 aaPredicted RBP16.5■□□□□ 0.23
LMNA-201ENST00000347559 ZC3H18Q86VM9 953 aaKnown RBP16.5■□□□□ 0.23
LMNA-201ENST00000347559 RFFLQ8WZ73 363 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 LRRC37BQ96QE4 947 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 GCNT4Q9P109 453 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 TTC7AQ9ULT0 858 aaPredicted RBP16.5■□□□□ 0.23
LMNA-201ENST00000347559 KCPQ6ZWJ8 1503 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 PHF2O75151 1096 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 LRRC23Q53EV4 343 aaPredicted RBP16.5■□□□□ 0.23
LMNA-201ENST00000347559 CCDC65Q8IXS2 484 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 AGGF1Q8N302 714 aaeCLIP16.5■□□□□ 0.239e-9■■■■■ 30.4
LMNA-201ENST00000347559 SLC44A5Q8NCS7 719 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 KRT35Q92764 455 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 ZBTB1Q9Y2K1 713 aa16.5■□□□□ 0.23
LMNA-201ENST00000347559 KAT6BQ8WYB5 2073 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 A0A0A6YYK5 440 aaPredicted RBP16.49■□□□□ 0.23
LMNA-201ENST00000347559 CALCOCO2Q13137 446 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 GPBP1Q86WP2 473 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 NBPF5PQ86XG9 351 aaPredicted RBP16.49■□□□□ 0.23
LMNA-201ENST00000347559 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.49■□□□□ 0.23
LMNA-201ENST00000347559 NT5C3AQ9H0P0 336 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 DENND2DQ9H6A0 471 aaPredicted RBP16.49■□□□□ 0.23
LMNA-201ENST00000347559 NMRK1Q9NWW6 199 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 PARP2Q9UGN5 583 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
LMNA-201ENST00000347559 CCDC88AQ3V6T2 1871 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 CASZ1Q86V15 1759 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 TULP1O00294 542 aaPredicted RBP16.49■□□□□ 0.23
LMNA-201ENST00000347559 TNNI2P48788 182 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 DNAJC3Q13217 504 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 CTTNQ14247 550 aaKnown RBP16.49■□□□□ 0.23
LMNA-201ENST00000347559 RNF43Q68DV7 783 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 LRRC8CQ8TDW0 803 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 MTMR9Q96QG7 549 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 TMEM109Q9BVC6 243 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 THAP2Q9H0W7 228 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 LRMDAQ9H2I8 198 aa16.49■□□□□ 0.23
LMNA-201ENST00000347559 TCRBV7S2A1N4TA0A589 114 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 ACADSP16219 412 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 STAT1P42224 750 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 DRG2P55039 364 aaKnown RBP16.48■□□□□ 0.23
LMNA-201ENST00000347559 KYNUQ16719 465 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 MFSD5Q6N075 450 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 DGKHQ86XP1 1220 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 SPOCK2Q92563 424 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 RUNDC3BQ96NL0 473 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 PIGSQ96S52 555 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 TAS2R14Q9NYV8 317 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 KIAA1024Q9UPX6 916 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 CHRNA3P32297 505 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 FOXN2P32314 431 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 PRKCIP41743 596 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 SKIV2L2P42285 1042 aaKnown RBP16.48■□□□□ 0.23
LMNA-201ENST00000347559 MECOMQ03112 1051 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 MTFR1Q15390 333 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 SGSM1Q2NKQ1 1148 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 PARP6Q2NL67 630 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 TNFAIP8L3Q5GJ75 292 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 CCNJLQ8IV13 435 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 CYP4X1Q8N118 509 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
LMNA-201ENST00000347559 KCTD10Q9H3F6 313 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 USP40Q9NVE5 1235 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 CHKBQ9Y259 395 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 PODXLO00592 558 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 KCNA3P22001 575 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 SERPINB4P48594 390 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 CASP5P51878 434 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 NPEPPSP55786 919 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 RRP1BQ14684 758 aaKnown RBP16.48■□□□□ 0.23
LMNA-201ENST00000347559 BICDL1Q6ZP65 573 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 ZDHHC14Q8IZN3 488 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 RBBP8NLQ8NC74 664 aaPredicted RBP16.48■□□□□ 0.23
LMNA-201ENST00000347559 ZFAND2BQ8WV99 257 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 RBM41Q96IZ5 413 aaKnown RBP16.48■□□□□ 0.23
LMNA-201ENST00000347559 LMCD1Q9NZU5 365 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 PCDHB13Q9Y5F0 798 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 ALG6Q9Y672 507 aa16.48■□□□□ 0.23
LMNA-201ENST00000347559 PITPNM2Q9BZ72 1349 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 DOCK2Q92608 1830 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 ATP9AO75110 1047 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 VCAM1P19320 739 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 ATP5DP30049 168 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 TRIP13Q15645 432 aaPredicted RBP16.47■□□□□ 0.23
LMNA-201ENST00000347559 CCDC152Q4G0S7 254 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 FAM210AQ96ND0 272 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 TMEM47Q9BQJ4 181 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 ROPN1BQ9BZX4 212 aaPredicted RBP16.47■□□□□ 0.23
LMNA-201ENST00000347559 ROPN1Q9HAT0 212 aaPredicted RBP16.47■□□□□ 0.23
LMNA-201ENST00000347559 SLCO1B3Q9NPD5 702 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 CTTNBP2NLQ9P2B4 639 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 E7ENQ6 273 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 SMAPO00193 183 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 CLIC2O15247 247 aa16.47■□□□□ 0.23
LMNA-201ENST00000347559 FXR2P51116 673 aaKnown RBP eCLIP16.47■□□□□ 0.231e-7■■□□□ 13.8
LMNA-201ENST00000347559 POLGP54098 1239 aaPredicted RBP16.47■□□□□ 0.23
LMNA-201ENST00000347559 FOXB2Q5VYV0 432 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms