RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 ANKFY1Q9P2R3 1169 aa16.67■□□□□ 0.26
PTPRU-201ENST00000345512 ZNF233A6NK53 670 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 I3L4J1 428 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 SLC16A4O15374 487 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 KRT19P08727 400 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 TAF11Q15544 211 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 CYP26A1O43174 497 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 PHF2O75151 1096 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 LONRF1Q17RB8 773 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 BRDTQ58F21 947 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-201ENST00000345512 SLC10A5Q5PT55 438 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 RTFDC1Q9BY42 306 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-201ENST00000345512 NPY5RQ15761 445 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 SYT2Q8N9I0 419 aaPredicted RBP16.66■□□□□ 0.26
PTPRU-201ENST00000345512 BAP1Q92560 729 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 THAP2Q9H0W7 228 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 CARD9Q9H257 536 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 TDRD3Q9H7E2 651 aaKnown RBP16.66■□□□□ 0.26
PTPRU-201ENST00000345512 TNS2Q63HR2 1409 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 ALCAMQ13740 583 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 LRRC55Q6ZSA7 311 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 SGSM3Q96HU1 749 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 RILPQ96NA2 401 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 TGS1Q96RS0 853 aaKnown RBP16.66■□□□□ 0.26
PTPRU-201ENST00000345512 VCXQ9H320 206 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 ECT2Q9H8V3 914 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 SAYSD1Q9NPB0 183 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 MRC1P22897 1456 aa16.66■□□□□ 0.26
PTPRU-201ENST00000345512 AFDNP55196 1824 aaKnown RBP16.65■□□□□ 0.26
PTPRU-201ENST00000345512 IPO5O00410 1097 aaKnown RBP16.65■□□□□ 0.26
PTPRU-201ENST00000345512 CCHCR1Q8TD31 782 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 MRPL47Q9HD33 250 aaKnown RBP16.65■□□□□ 0.26
PTPRU-201ENST00000345512 CCT8L1PA6NM43 557 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 EIF2AK2P19525 551 aaKnown RBP16.65■□□□□ 0.26
PTPRU-201ENST00000345512 HNRNPH3P31942 346 aaKnown RBP16.65■□□□□ 0.26
PTPRU-201ENST00000345512 DYNLT1P63172 113 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 KRT17Q04695 432 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 HP1BP3Q5SSJ5 553 aaPredicted RBP16.65■□□□□ 0.26
PTPRU-201ENST00000345512 CYB5D1Q6P9G0 228 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 SAAL1Q96ER3 474 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 TBX3O15119 743 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 CAND2O75155 1236 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 KRT1P04264 644 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 COMTP21964 271 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 KCNMA1Q12791 1236 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 GIT2Q14161 759 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 SCYL3Q8IZE3 742 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 ETNK1Q9HBU6 452 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 NALCNQ8IZF0 1738 aa16.65■□□□□ 0.26
PTPRU-201ENST00000345512 CCDC160A6NGH7 325 aa16.64■□□□□ 0.26
PTPRU-201ENST00000345512 NDC80O14777 642 aa16.64■□□□□ 0.26
PTPRU-201ENST00000345512 ATMINO43313 823 aaPredicted RBP16.64■□□□□ 0.26
PTPRU-201ENST00000345512 LUC7L3O95232 432 aaKnown RBP16.64■□□□□ 0.26
PTPRU-201ENST00000345512 FECHP22830 423 aa16.64■□□□□ 0.26
PTPRU-201ENST00000345512 EPM2AIP1Q7L775 607 aaPredicted RBP16.64■□□□□ 0.26
PTPRU-201ENST00000345512 FBXO25Q8TCJ0 367 aa16.64■□□□□ 0.26
PTPRU-201ENST00000345512 HAUS1Q96CS2 278 aa16.64■□□□□ 0.26
PTPRU-201ENST00000345512 PABPC3Q9H361 631 aaKnown RBP16.64■□□□□ 0.26
PTPRU-201ENST00000345512 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.64■□□□□ 0.26
PTPRU-201ENST00000345512 INTUQ9ULD6 942 aa16.64■□□□□ 0.26
PTPRU-201ENST00000345512 TTC7AQ9ULT0 858 aaPredicted RBP16.64■□□□□ 0.26
PTPRU-201ENST00000345512 CLDN3O15551 220 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 MMTAG2Q9BU76 263 aaKnown RBP16.64■□□□□ 0.25
PTPRU-201ENST00000345512 RUSC1Q9BVN2 902 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 VCPKMTQ9H867 229 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 CFAP73A6NFT4 308 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 RFX1P22670 979 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 PSMC6P62333 389 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 LGSNQ5TDP6 509 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 SLC30A5Q8TAD4 765 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 PCDHGC5Q9Y5F6 944 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 LRRD1A4D1F6 860 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 RTN2O75298 545 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 NDUFB10O96000 172 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 KCTD19Q17RG1 926 aaPredicted RBP16.64■□□□□ 0.25
PTPRU-201ENST00000345512 MIGA2Q7L4E1 593 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 TRPM8Q7Z2W7 1104 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 PASD1Q8IV76 773 aa16.64■□□□□ 0.25
PTPRU-201ENST00000345512 LRRC37A3O60309 1634 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 H0Y3Z8 333 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 GGPS1O95749 300 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 FGRP09769 529 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 ZNF844Q08AG5 666 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 CEP55Q53EZ4 464 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 PRR5LQ6MZQ0 368 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 SLC17A8Q8NDX2 589 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 RNF25Q96BH1 459 aaPredicted RBP16.63■□□□□ 0.25
PTPRU-201ENST00000345512 SEPT9Q9UHD8 586 aaPredicted RBP16.63■□□□□ 0.25
PTPRU-201ENST00000345512 PPP2R5AQ15172 486 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 BARGINQ6ZT62 677 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 KCNV2Q8TDN2 545 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 C11orf70Q9BRQ4 267 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 ADAM22Q9P0K1 906 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 TOPAZ1Q8N9V7 1692 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 ADAMTS3O15072 1205 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 MAPK13O15264 365 aa16.63■□□□□ 0.25
PTPRU-201ENST00000345512 ECM2O94769 699 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms