RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ARHGEF10LQ9HCE6 1279 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 TYW1Q9NV66 732 aaKnown RBP10.42□□□□□ -0.74
HOXA1-201ENST00000343060 USP40Q9NVE5 1235 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 ETAA1Q9NY74 926 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 GGT7Q9UJ14 662 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 KIAA1024Q9UPX6 916 aa10.42□□□□□ -0.74
HOXA1-201ENST00000343060 WNK3Q9BYP7 1800 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 POTEB3A0JP26 581 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ANKRD62A6NC57 917 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 POTECB2RU33 542 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 NPTXRO95502 500 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 EYA4O95677 639 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 TTLL1O95922 423 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 CDC25CP30307 473 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 CRKLP46109 303 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 SLCO1A2P46721 670 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 MAP2K1Q02750 393 aaPredicted RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ZNF211Q13398 564 aaPredicted RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 RRP1BQ14684 758 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 RBBP5Q15291 538 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 GJB7Q6PEY0 223 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 POTEBQ6S5H4 581 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 GLYCTKQ8IVS8 523 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ENDOVQ8N8Q3 282 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 CFAP61Q8NHU2 1237 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 PARD3BQ8TEW8 1205 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 SH3TC2Q8TF17 1288 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 C7orf43Q8WVR3 580 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ARHGEF2Q92974 986 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 TMEM237Q96Q45 408 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 EYA3Q99504 573 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 NAP1L4Q99733 375 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 GPR88Q9GZN0 384 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 TXLNGQ9NUQ3 528 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 KCNG1Q9UIX4 513 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 DBR1Q9UK59 544 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 PCDHA12Q9UN75 941 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 COG5Q9UP83 839 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 PEX11AO75192 247 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 NR3C1P04150 777 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 SNHG28P0DPA3 235 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 KRT13P13646 458 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 PECAM1P16284 738 aaPredicted RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ATP4AP20648 1035 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 PEX19P40855 299 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 TNNI2P48788 182 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 CDK8P49336 464 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 CACNB1Q02641 598 aaPredicted RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 GIT2Q14161 759 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 MTFR1Q15390 333 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 NFIL3Q16649 462 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ASPRV1Q53RT3 343 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 DCAF17Q5H9S7 520 aaPredicted RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 NUGGCQ68CJ6 796 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ANO7Q6IWH7 933 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 BRINP3Q76B58 766 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ADAT2Q7Z6V5 191 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 RHOT2Q8IXI1 618 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 DYDC1Q8WWB3 177 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 CELF1Q92879 486 aaKnown RBP10.41□□□□□ -0.74
HOXA1-201ENST00000343060 SLCO2A1Q92959 643 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 COA7Q96BR5 231 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 ZSWIM1Q9BR11 485 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 TAOK3Q9H2K8 898 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 AAASQ9NRG9 546 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 TRIM33Q9UPN9 1127 aa10.41□□□□□ -0.74
HOXA1-201ENST00000343060 USP17L5A8MUK1 530 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 ANKRD63C9JTQ0 380 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 ATP5HO75947 161 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 CALB2P22676 271 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 RPL13P26373 211 aaKnown RBP10.4□□□□□ -0.74
HOXA1-201ENST00000343060 EVA1CP58658 441 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 MRPS35P82673 323 aaKnown RBP10.4□□□□□ -0.74
HOXA1-201ENST00000343060 LBRQ14739 615 aaKnown RBP10.4□□□□□ -0.74
HOXA1-201ENST00000343060 LRRC14Q15048 493 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 SIX1Q15475 284 aaPredicted RBP10.4□□□□□ -0.74
HOXA1-201ENST00000343060 RHBDF2Q6PJF5 856 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 ECHDC2Q86YB7 292 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 MFN1Q8IWA4 741 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 AGGF1Q8N302 714 aaeCLIP10.4□□□□□ -0.74
HOXA1-201ENST00000343060 FBF1Q8TES7 1133 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 MAGEB18Q96M61 343 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 MBOAT7Q96N66 472 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 RPS6KC1Q96S38 1066 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 VAT1LQ9HCJ6 419 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 TMOD4Q9NZQ9 345 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 LGALS13Q9UHV8 139 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 RPL26L1Q9UNX3 145 aaKnown RBP10.4□□□□□ -0.74
HOXA1-201ENST00000343060 STK38LQ9Y2H1 464 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 ADGRA3Q8IWK6 1321 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 PASKQ96RG2 1323 aa10.4□□□□□ -0.74
HOXA1-201ENST00000343060 GPR75-ASB3A0A0A6YYF3 556 aa10.4□□□□□ -0.75
HOXA1-201ENST00000343060 ENO4A6NNW6 628 aa10.4□□□□□ -0.75
HOXA1-201ENST00000343060 TP73O15350 636 aa10.4□□□□□ -0.75
HOXA1-201ENST00000343060 HIP1RO75146 1068 aa10.4□□□□□ -0.75
HOXA1-201ENST00000343060 MTA2O94776 668 aa10.4□□□□□ -0.75
HOXA1-201ENST00000343060 ATP6V1C1P21283 382 aa10.4□□□□□ -0.75
HOXA1-201ENST00000343060 RXRBP28702 533 aa10.4□□□□□ -0.75
HOXA1-201ENST00000343060 COILP38432 576 aaPredicted RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms