RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 DUSP10Q9Y6W6 482 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 GFPT1Q06210 699 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 SLC39A4Q6P5W5 647 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 TAS1R3Q7RTX0 852 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 C12orf56Q8IXR9 622 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 EXOC7Q9UPT5 735 aa24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 V9GYY5 206 aaPredicted RBP24.47■■□□□ 1.51
PDLIM2-203ENST00000339162 CTIFO43310 598 aaKnown RBP24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 KRT13P13646 458 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 PPP2R5AQ15172 486 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 SPA17Q15506 151 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 KCNV1Q6PIU1 500 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 CBWD2Q8IUF1 395 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 MORC4Q8TE76 937 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 SPAG5Q96R06 1193 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 NRBP2Q9NSY0 501 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 HUNKP57058 714 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 RTP1P59025 263 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 ZNF792Q3KQV3 632 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 SLC9C1Q4G0N8 1177 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 PLEKHO2Q8TD55 490 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 AFAP1L1Q8TED9 768 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 UBE2Q2Q8WVN8 375 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 JAKMIP2Q96AA8 810 aa24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 CGNQ9P2M7 1197 aaKnown RBP24.46■■□□□ 1.51
PDLIM2-203ENST00000339162 ASB14A6NK59 587 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 HNRNPDLO14979 420 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 ADRB2P07550 413 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 PNMA6AP0CW24 399 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 GLRA2P23416 452 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 VAMP7P51809 220 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 DRP2Q13474 957 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 INTS8Q75QN2 995 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 NUCKS1Q9H1E3 243 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 IVNS1ABPQ9Y6Y0 642 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 GTPBP10A4D1E9 387 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 ZBTB48P10074 688 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 GCLCP48506 637 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 PPP3CAQ08209 521 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 TARBP2Q15633 366 aaKnown RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 SYN2Q92777 582 aaPredicted RBP24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 BICD1Q96G01 975 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 HAUS4Q9H6D7 363 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 ARHGAP28Q9P2N2 729 aa24.45■■□□□ 1.5
PDLIM2-203ENST00000339162 EMSYQ7Z589 1322 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 LRRIQ4A6NIV6 560 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 RRP9O43818 475 aaKnown RBP24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 LRRN2O75325 713 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 SLU7O95391 586 aaKnown RBP24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 SERPING1P05155 500 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 GCLMP48507 274 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 RBM10P98175 930 aaKnown RBP24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 MYL7Q01449 175 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 ASTE1Q2TB18 679 aaPredicted RBP24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 IQCEQ6IPM2 695 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 HVCN1Q96D96 273 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 IFIH1Q9BYX4 1025 aaKnown RBP24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 MORF4L1Q9UBU8 362 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 PCDHA13Q9Y5I0 950 aa24.44■■□□□ 1.5
PDLIM2-203ENST00000339162 TTLL4Q14679 1199 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 ASIC2Q16515 512 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 SNRNP35Q16560 246 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 C1orf220Q5T0J3 134 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 POMGNT1Q8WZA1 660 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 AIPL1Q9NZN9 384 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 ITGBL1O95965 494 aaPredicted RBP24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 ARL2P36404 184 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 KLHL30Q0D2K2 578 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 GPR142Q7Z601 462 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 SCFD2Q8WU76 684 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 TMEM174Q8WUU8 243 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 CCDC127Q96BQ5 260 aa24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 PARK7Q99497 189 aaKnown RBP24.43■■□□□ 1.5
PDLIM2-203ENST00000339162 VAV2P52735 878 aa24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 SNRPFP62306 86 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 MAPK8IP2Q13387 824 aaPredicted RBP24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 INTS2Q9H0H0 1204 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 SUGCTQ9HAC7 445 aa24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 MACROD2A1Z1Q3 448 aa24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 IRF2BP2Q7Z5L9 587 aa24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 POP1Q99575 1024 aaKnown RBP24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.42■■□□□ 1.5
PDLIM2-203ENST00000339162 SSU72P8A0A1W2PR75 194 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 KRT86O43790 486 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 TAPT1Q6NXT6 567 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 DPP9Q86TI2 863 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 DEPTORQ8TB45 409 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 TRAPPC12Q8WVT3 735 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 ZBTB10Q96DT7 871 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 LGR5O75473 907 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 LCA5LO95447 670 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 RFC5P40937 340 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 KIF5AQ12840 1032 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 ADAMTS1Q9UHI8 967 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 CPA4Q9UI42 421 aa24.41■■□□□ 1.5
PDLIM2-203ENST00000339162 PLXNB2O15031 1838 aa24.4■■□□□ 1.5
PDLIM2-203ENST00000339162 STRNO43815 780 aa24.4■■□□□ 1.5
PDLIM2-203ENST00000339162 MAFO75444 373 aaPredicted RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms