RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 CEP170P1Q96L14 293 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 OSBPL5Q9H0X9 879 aaPredicted RBP17.48■□□□□ 0.39
SMAD3-201ENST00000327367 CAAP1Q9H8G2 361 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.48■□□□□ 0.39
SMAD3-201ENST00000327367 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 TTC26A0AVF1 554 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 AIM2O14862 343 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 TARSP26639 723 aaKnown RBP17.48■□□□□ 0.39
SMAD3-201ENST00000327367 LVRNQ6Q4G3 990 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 PI16Q6UXB8 463 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 NCAPG2Q86XI2 1143 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 NMD3Q96D46 503 aaKnown RBP17.48■□□□□ 0.39
SMAD3-201ENST00000327367 PARVGQ9HBI0 331 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 ADAM22Q9P0K1 906 aa17.48■□□□□ 0.39
SMAD3-201ENST00000327367 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.47■□□□□ 0.393e-6■■■■■ 31.9
SMAD3-201ENST00000327367 PTPREP23469 700 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 CATSPER1Q8NEC5 780 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 MDM1Q8TC05 714 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 ANKRD7Q92527 254 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 RNPC3Q96LT9 517 aaKnown RBP17.47■□□□□ 0.39
SMAD3-201ENST00000327367 PUS7LQ9H0K6 701 aaKnown RBP17.47■□□□□ 0.39
SMAD3-201ENST00000327367 LRRC4Q9HBW1 653 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 CASS4Q9NQ75 786 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 C20orf96Q9NUD7 363 aaPredicted RBP17.47■□□□□ 0.39
SMAD3-201ENST00000327367 C6orf203Q9P0P8 240 aaPredicted RBP17.47■□□□□ 0.39
SMAD3-201ENST00000327367 AFF4Q9UHB7 1163 aaKnown RBP17.47■□□□□ 0.39
SMAD3-201ENST00000327367 ITM2BQ9Y287 266 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 PDHBP11177 359 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 DOK7Q18PE1 504 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 MTERF2Q49AM1 385 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 HDDC2Q7Z4H3 204 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 TLK2Q86UE8 772 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 PBXIP1Q96AQ6 731 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 OMA1Q96E52 524 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 ACAP3Q96P50 834 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 STMN3Q9NZ72 180 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 GRID2IPA4D2P6 1211 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 TMEM247A6NEH6 219 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 SIX6OS1Q8N1H7 587 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 VPS39Q96JC1 886 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 TSSK1BQ9BXA7 367 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 ASPSCR1Q9BZE9 553 aa17.47■□□□□ 0.39
SMAD3-201ENST00000327367 DAB2IPQ5VWQ8 1189 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 USP17L2Q6R6M4 530 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 ZNF496Q96IT1 587 aaPredicted RBP17.46■□□□□ 0.39
SMAD3-201ENST00000327367 EXOSC4Q9NPD3 245 aaKnown RBP17.46■□□□□ 0.39
SMAD3-201ENST00000327367 NRBP2Q9NSY0 501 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 COPG1Q9Y678 874 aaKnown RBP17.46■□□□□ 0.39
SMAD3-201ENST00000327367 SMARCA1P28370 1054 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 ANGPT1Q15389 498 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 PIGOQ8TEQ8 1089 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 C11orf70Q9BRQ4 267 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 PLEKHA8P1O95397 391 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 PAMP19021 973 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 KRT26Q7Z3Y9 468 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 IFNEQ86WN2 208 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 AGGF1Q8N302 714 aaeCLIP17.46■□□□□ 0.39
SMAD3-201ENST00000327367 TMEM206Q9H813 350 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 IL1RL2Q9HB29 575 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 M0R3G1 203 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 PDCD6IPQ8WUM4 868 aaKnown RBP17.46■□□□□ 0.39
SMAD3-201ENST00000327367 GRAMD1AQ96CP6 724 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 PRPF18Q99633 342 aaKnown RBP17.46■□□□□ 0.39
SMAD3-201ENST00000327367 BBS2Q9BXC9 721 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 CYB5D1Q6P9G0 228 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 C11orf74Q86VG3 221 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 RHPN2Q8IUC4 686 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 HIC2Q96JB3 615 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 FSD1LQ9BXM9 530 aa17.46■□□□□ 0.39
SMAD3-201ENST00000327367 GCLMP48507 274 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 KIAA0825Q8IV33 1275 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 XPO6Q96QU8 1125 aaKnown RBP17.45■□□□□ 0.38
SMAD3-201ENST00000327367 WWP1Q9H0M0 922 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 BCS1LQ9Y276 419 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 OCM2P0CE71 109 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 OCMP0CE72 109 aaPredicted RBP17.45■□□□□ 0.38
SMAD3-201ENST00000327367 LRRC63Q05C16 580 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 TBC1D4O60343 1298 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 LRRC31Q6UY01 552 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 FAM96AQ9H5X1 160 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 ZSWIM5Q9P217 1185 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 MKL2Q9ULH7 1088 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 TARSL2A2RTX5 802 aaKnown RBP17.45■□□□□ 0.38
SMAD3-201ENST00000327367 PAX7P23759 505 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 CAV1Q03135 178 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 KDELC2Q7Z4H8 507 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 CASP10Q92851 521 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 SHCBP1LQ9BZQ2 653 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 STAP2Q9UGK3 403 aa17.45■□□□□ 0.38
SMAD3-201ENST00000327367 LIMA1Q9UHB6 759 aaKnown RBP17.45■□□□□ 0.38
SMAD3-201ENST00000327367 B2RBV5 119 aa17.44■□□□□ 0.38
SMAD3-201ENST00000327367 HOXA13P31271 388 aaPredicted RBP17.44■□□□□ 0.38
SMAD3-201ENST00000327367 PAPOLAP51003 745 aaKnown RBP17.44■□□□□ 0.38
SMAD3-201ENST00000327367 IRAK1P51617 712 aa17.44■□□□□ 0.38
SMAD3-201ENST00000327367 ARMCX6Q7L4S7 300 aa17.44■□□□□ 0.38
SMAD3-201ENST00000327367 TTC8Q8TAM2 541 aa17.44■□□□□ 0.38
SMAD3-201ENST00000327367 RIN3Q8TB24 985 aa17.44■□□□□ 0.38
SMAD3-201ENST00000327367 BTN2A2Q8WVV5 523 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms