RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 TYW1Q9NV66 732 aaKnown RBP19.28■□□□□ 0.68
PRKCB-202ENST00000321728 SYNGAP1Q96PV0 1343 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 RAD21O60216 631 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 RARGP13631 454 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 KCNA1Q09470 495 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 CLEC4GQ6UXB4 293 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 SPATA21Q7Z572 469 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 CCDC105Q8IYK2 499 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 ADGRF4Q8IZF3 695 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 OLIG1Q8TAK6 271 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 GDAP1Q8TB36 358 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 KRT35Q92764 455 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 MXD3Q9BW11 206 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 ARL2BPQ9Y2Y0 163 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 ASTN1O14525 1302 aa19.27■□□□□ 0.68
PRKCB-202ENST00000321728 SRCAPQ6ZRS2 3230 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 CREB1P16220 341 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 MARCKSL1P49006 195 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 CLK2P49760 499 aaKnown RBP19.27■□□□□ 0.67
PRKCB-202ENST00000321728 ANKRD20A2Q5SQ80 823 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 ANKRD20A1Q5TYW2 823 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 ANKRD20A3Q5VUR7 823 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 FITM2Q8N6M3 262 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 UBL4BQ8N7F7 174 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 TBC1D16Q8TBP0 767 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 FAM167BQ9BTA0 163 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 STK33Q9BYT3 514 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 ARHGEF3Q9NR81 526 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 DNM3Q9UQ16 869 aa19.27■□□□□ 0.67
PRKCB-202ENST00000321728 GNPATO15228 680 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 SLC16A3O15427 465 aaKnown RBP19.26■□□□□ 0.67
PRKCB-202ENST00000321728 SMNDC1O75940 238 aaKnown RBP eCLIP19.26■□□□□ 0.67
PRKCB-202ENST00000321728 ACSL3O95573 720 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 EPM2AIP1Q7L775 607 aaPredicted RBP19.26■□□□□ 0.67
PRKCB-202ENST00000321728 CATSPER3Q86XQ3 398 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 PALB2Q86YC2 1186 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 KCNV2Q8TDN2 545 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 ZNF483Q8TF39 744 aaPredicted RBP19.26■□□□□ 0.67
PRKCB-202ENST00000321728 SAAL1Q96ER3 474 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 CTTNBP2NLQ9P2B4 639 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 THRAP3Q9Y2W1 955 aaKnown RBP19.26■□□□□ 0.67
PRKCB-202ENST00000321728 RSPH10B2B2RC85 870 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 RSPH10BP0C881 870 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 SLC16A2P36021 539 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 PICALMQ13492 652 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 ARHGAP44Q17R89 818 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 TNFAIP8L3Q5GJ75 292 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 RUNDC3BQ96NL0 473 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 RTFDC1Q9BY42 306 aaPredicted RBP19.26■□□□□ 0.67
PRKCB-202ENST00000321728 BCAS3Q9H6U6 928 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 SPATS2LQ9NUQ6 558 aaKnown RBP19.26■□□□□ 0.67
PRKCB-202ENST00000321728 ADAM22Q9P0K1 906 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 PCYOX1Q9UHG3 505 aa19.26■□□□□ 0.67
PRKCB-202ENST00000321728 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.26■□□□□ 0.671e-6■■■■□ 24.5
PRKCB-202ENST00000321728 ROBO1Q9Y6N7 1651 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 SPATA31A1Q5TZJ5 1347 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 GTPBP10A4D1E9 387 aaKnown RBP19.25■□□□□ 0.67
PRKCB-202ENST00000321728 EIF4E1BA6NMX2 242 aaKnown RBP19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L15C9J2P7 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L13C9JLJ4 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 ANKRD63C9JTQ0 380 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L11C9JVI0 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L18D6R9N7 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L22D6RA61 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L17D6RBQ6 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L19D6RCP7 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L20D6RJB6 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 HSPA6P17066 643 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L24Q0WX57 530 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 TTBK2Q6IQ55 1244 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 MFSD5Q6N075 450 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 PPP1R18Q6NYC8 613 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 MIS18BP1Q6P0N0 1132 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 USP17L6PQ6QN14 398 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 CNKSR1Q969H4 720 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 DDX23Q9BUQ8 820 aaKnown RBP19.25■□□□□ 0.67
PRKCB-202ENST00000321728 RXFP1Q9HBX9 757 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 ANKRD62A6NC57 917 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 FAM186BQ8IYM0 893 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 IKZF4Q9H2S9 585 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 MTMR4Q9NYA4 1195 aa19.25■□□□□ 0.67
PRKCB-202ENST00000321728 ENO4A6NNW6 628 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 FOXO6A8MYZ6 492 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 MKRN4PQ13434 485 aaPredicted RBP19.24■□□□□ 0.67
PRKCB-202ENST00000321728 FAM98CQ17RN3 349 aaKnown RBP19.24■□□□□ 0.67
PRKCB-202ENST00000321728 SEL1L2Q5TEA6 688 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 CDCA2Q69YH5 1023 aaPredicted RBP19.24■□□□□ 0.67
PRKCB-202ENST00000321728 ZDHHC14Q8IZN3 488 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 ROPN1BQ9BZX4 212 aaPredicted RBP19.24■□□□□ 0.67
PRKCB-202ENST00000321728 ROPN1Q9HAT0 212 aaPredicted RBP19.24■□□□□ 0.67
PRKCB-202ENST00000321728 PFASO15067 1338 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 O00370 1275 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 LRRN2O75325 713 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 TBCAO75347 108 aaKnown RBP19.24■□□□□ 0.67
PRKCB-202ENST00000321728 KCNJ1P48048 391 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 CALCOCO2Q13137 446 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 TAF11Q15544 211 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 RMDN2Q96LZ7 410 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 PLCD4Q9BRC7 762 aa19.24■□□□□ 0.67
PRKCB-202ENST00000321728 TRIM7Q9C029 511 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms