RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 KRT83P78385 493 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 PPP3CAQ08209 521 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 TRIM29Q14134 588 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 RASA2Q15283 850 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 CTAGE6Q86UF2 777 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 CTAGE4Q8IX94 777 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 UBA5Q9GZZ9 404 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 TLE6Q9H808 572 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 TUFT1Q9NNX1 390 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 OSGEPQ9NPF4 335 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 LGALS13Q9UHV8 139 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 DBR1Q9UK59 544 aaKnown RBP8.56□□□□□ -1.04
CNOT4-201ENST00000315544 ZMYND10O75800 440 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 TMEM253P0C7T8 217 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 SLC18A1P54219 525 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 CALCRLQ16602 461 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 GLIPR1L2Q4G1C9 344 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 ARFGAP1Q8N6T3 406 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 MYCBPAPQ8TBZ2 947 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 MORC4Q8TE76 937 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 SHC3Q92529 594 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 TBC1D5Q92609 795 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 SECISBP2LQ93073 1101 aaKnown RBP8.56□□□□□ -1.04
CNOT4-201ENST00000315544 ZC3H12CQ9C0D7 883 aaKnown RBP8.56□□□□□ -1.04
CNOT4-201ENST00000315544 HYOU1Q9Y4L1 999 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 DENND4AQ7Z401 1863 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 ADM5C9JUS6 153 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 GSTO1P78417 241 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 FMO1Q01740 532 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 GPATCH4Q5T3I0 446 aaKnown RBP8.56□□□□□ -1.04
CNOT4-201ENST00000315544 GJB7Q6PEY0 223 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 POTEGQ6S5H5 508 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 JDP2Q8WYK2 163 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 LRRC19Q9H756 370 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
CNOT4-201ENST00000315544 CCNB1P14635 433 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 MARCKSL1P49006 195 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 ATP2B2Q01814 1243 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 PPFIA1Q13136 1202 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 KCTD19Q17RG1 926 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 DOK7Q18PE1 504 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 CCDC122Q5T0U0 273 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 FKBP15Q5T1M5 1219 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 AGBL2Q5U5Z8 902 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 SAMD7Q7Z3H4 446 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 CCDC84Q86UT8 332 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 EEF2KMTQ96G04 330 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 FAM20AQ96MK3 541 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 EBF2Q9HAK2 575 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 TYW1Q9NV66 732 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 DDX20Q9UHI6 824 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 DDX25Q9UHL0 483 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 CNTNAP2Q9UHC6 1331 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 PSMA7O14818 248 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 CTGFP29279 349 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 TEX35Q5T0J7 233 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 ARHGEF19Q8IW93 802 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 DDX27Q96GQ7 796 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 IFIH1Q9BYX4 1025 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 CCDC113Q9H0I3 377 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 VCPKMTQ9H867 229 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 NLRC4Q9NPP4 1024 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 ARHGEF4Q9NR80 690 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 CALCOCO1Q9P1Z2 691 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 FRMPD2Q68DX3 1309 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 SCN1AP35498 2009 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 TRAF5O00463 557 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 FSCN2O14926 492 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 ENDOD1O94919 500 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 GJB6O95452 261 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 FAM107AO95990 144 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 RHOXF2BP0C7M4 288 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 EEF2P13639 858 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 CDH5P33151 784 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 SLC7A5Q01650 507 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 ACTN3Q08043 901 aaPredicted RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 LRRC41Q15345 812 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 C17orf99Q6UX52 265 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 GBP6Q6ZN66 633 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 NOP9Q86U38 636 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 EPS8L1Q8TE68 723 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 RHOXF2Q9BQY4 288 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 NOC4LQ9BVI4 516 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 ANO3Q9BYT9 981 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 GGA3Q9NZ52 723 aa8.55□□□□□ -1.04
CNOT4-201ENST00000315544 HERC5Q9UII4 1024 aaKnown RBP8.55□□□□□ -1.04
CNOT4-201ENST00000315544 TSPY2A6NKD2 308 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L15C9J2P7 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L13C9JLJ4 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L11C9JVI0 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L18D6R9N7 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L22D6RA61 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L17D6RBQ6 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L19D6RCP7 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L20D6RJB6 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 ARHGAP4P98171 946 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 TBC1D8BQ0IIM8 1120 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 USP17L24Q0WX57 530 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 UGCGQ16739 394 aa8.54□□□□□ -1.04
CNOT4-201ENST00000315544 CMPK2Q5EBM0 449 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms