RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 ZFYVE27Q5T4F4 411 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 POP1Q99575 1024 aaKnown RBP15.86■□□□□ 0.13
CCNF-201ENST00000293968 KCNMB3Q9NPA1 279 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 HOMER3Q9NSC5 361 aa15.86■□□□□ 0.13
CCNF-201ENST00000293968 C5orf60A6NFR6 353 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 KIAA0391O15091 583 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 CFBP00751 764 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 SPATA31C1P0DKV0 1188 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 XRCC4Q13426 336 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 HYIQ5T013 277 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 C1orf54Q8WWF1 131 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 PRCCQ92733 491 aaPredicted RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 MRRFQ96E11 262 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 EEF2P13639 858 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 GJC1P36383 396 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 SSR1P43307 286 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 CLK2P49760 499 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 KCNJ2P63252 427 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 DHX34Q14147 1143 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 RPUSD2Q8IZ73 545 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■■□□□ 12.6
CCNF-201ENST00000293968 PHF2O75151 1096 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 PAEPP09466 180 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 COMTP21964 271 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 JAM2P57087 298 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 PPP2R5AQ15172 486 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 P3H4Q92791 437 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 ARHGEF2Q92974 986 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 DYDC2Q96IM9 177 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 DDX23Q9BUQ8 820 aaKnown RBP15.85■□□□□ 0.13
CCNF-201ENST00000293968 INTUQ9ULD6 942 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 ZBTB21Q9ULJ3 1066 aa15.85■□□□□ 0.13
CCNF-201ENST00000293968 DNAJC8O75937 253 aaPredicted RBP15.84■□□□□ 0.13
CCNF-201ENST00000293968 GDF11O95390 407 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 DLATP10515 647 aaKnown RBP15.84■□□□□ 0.13
CCNF-201ENST00000293968 KLRC3Q07444 240 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 PARVGQ9HBI0 331 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 ACP6Q9NPH0 428 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 STRCP1A6NGW2 1772 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 ANKRD62A6NC57 917 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 SLC16A3O15427 465 aaKnown RBP15.84■□□□□ 0.13
CCNF-201ENST00000293968 BCRP11274 1271 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 GCLMP48507 274 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 NPEPPSP55786 919 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 CETN1Q12798 172 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 TNIP1Q15025 636 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 TRAPPC3LQ5T215 181 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 AMIGO3Q86WK7 504 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 FBXO11Q86XK2 927 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 AGPAT1Q99943 283 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 APEX2Q9UBZ4 518 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 TCRBV7S2A1N4TA0A589 114 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 EML1O00423 815 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 MSH4O15457 936 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 TGFB1I1O43294 461 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 AGTP01019 485 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 ATP2B4P23634 1241 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 CHRNA3P32297 505 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 LACTB2Q53H82 288 aaPredicted RBP15.84■□□□□ 0.13
CCNF-201ENST00000293968 KCNV2Q8TDN2 545 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 TBC1D22AQ8WUA7 517 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 AMNQ9BXJ7 453 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 ZDHHC18Q9NUE0 388 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 PARP2Q9UGN5 583 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 SYNGAP1Q96PV0 1343 aa15.84■□□□□ 0.13
CCNF-201ENST00000293968 IGF2BP3O00425 579 aaKnown RBP eCLIP15.83■□□□□ 0.13
CCNF-201ENST00000293968 PDE6CP51160 858 aa15.83■□□□□ 0.13
CCNF-201ENST00000293968 RINT1Q6NUQ1 792 aa15.83■□□□□ 0.13
CCNF-201ENST00000293968 CPNE8Q86YQ8 564 aa15.83■□□□□ 0.13
CCNF-201ENST00000293968 ELMO3Q96BJ8 720 aa15.83■□□□□ 0.13
CCNF-201ENST00000293968 PASKQ96RG2 1323 aa15.83■□□□□ 0.13
CCNF-201ENST00000293968 TMEM120BA0PK00 339 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 DIAPH2O60879 1101 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 SUN1O94901 812 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 POLD1P28340 1107 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 STX2P32856 288 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 MMP13P45452 471 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 PPM1KQ8N3J5 372 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 PRELID2Q8N945 189 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 MICAL1Q8TDZ2 1067 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 MIEF2Q96C03 454 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 GLT8D2Q9H1C3 349 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 CTNNAL1Q9UBT7 734 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 ANKRD63C9JTQ0 380 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 PPIP5K2O43314 1243 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 GHRP10912 638 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 ZDHHC24Q6UX98 284 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 SEPT14Q6ZU15 432 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 FAM47EQ6ZV65 393 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 STXBP4Q6ZWJ1 553 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 ZNF317Q96PQ6 595 aaPredicted RBP15.83■□□□□ 0.12
CCNF-201ENST00000293968 AGAP1Q9UPQ3 857 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 ATF5Q9Y2D1 282 aaPredicted RBP15.83■□□□□ 0.12
CCNF-201ENST00000293968 THRAP3Q9Y2W1 955 aaKnown RBP15.83■□□□□ 0.12
CCNF-201ENST00000293968 MYH14Q7Z406 1995 aaKnown RBP15.83■□□□□ 0.12
CCNF-201ENST00000293968 ANP32DO95626 131 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 CREB1P16220 341 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 PEX19P40855 299 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 TTC27Q6P3X3 843 aa15.83■□□□□ 0.12
CCNF-201ENST00000293968 ATXN2LQ8WWM7 1075 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms