RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SLC10A4Q96EP9 437 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 MMP19Q99542 508 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 INTS2Q9H0H0 1204 aaKnown RBP18.12■□□□□ 0.49
CCDC40-201ENST00000269318 POLR3FQ9H1D9 316 aaPredicted RBP18.12■□□□□ 0.49
CCDC40-201ENST00000269318 MROH8Q9H579 483 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 DHX33Q9H6R0 707 aaKnown RBP18.12■□□□□ 0.49
CCDC40-201ENST00000269318 ARHGAP28Q9P2N2 729 aa18.12■□□□□ 0.49
CCDC40-201ENST00000269318 BZW2Q9Y6E2 419 aaKnown RBP18.12■□□□□ 0.49
CCDC40-201ENST00000269318 A0A087X0T9 212 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 ATP1A1P05023 1023 aaKnown RBP18.11■□□□□ 0.49
CCDC40-201ENST00000269318 FAM228BP0C875 321 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 ERVK-9P63128 1117 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 KCTD2Q14681 263 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 EMC2Q15006 297 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 ZNF571Q7Z3V5 609 aaPredicted RBP18.11■□□□□ 0.49
CCDC40-201ENST00000269318 SRGAP1Q7Z6B7 1085 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 AFAP1L1Q8TED9 768 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 KCNN1Q92952 543 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 ENC1O14682 589 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 GRIN3BO60391 1043 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 ARIH2O95376 493 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 GGPS1O95749 300 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 ADRB2P07550 413 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 PPP3CAQ08209 521 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 WHAMMP3Q1A5X7 153 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 EEPD1Q7L9B9 569 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 TAS1R3Q7RTX0 852 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 EMSYQ7Z589 1322 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 TXLNBQ8N3L3 684 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 CEP112Q8N8E3 955 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 SHCBP1Q8NEM2 672 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 MORC4Q8TE76 937 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 MPHOSPH6Q99547 160 aaKnown RBP18.11■□□□□ 0.49
CCDC40-201ENST00000269318 MLXIPQ9HAP2 919 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 ADAMTS1Q9UHI8 967 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 SALL4Q9UJQ4 1053 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 DDX41Q9UJV9 622 aaKnown RBP18.11■□□□□ 0.49
CCDC40-201ENST00000269318 DAAM1Q9Y4D1 1078 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 CAPN6Q9Y6Q1 641 aa18.11■□□□□ 0.49
CCDC40-201ENST00000269318 ANO9A1A5B4 782 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 P4HA2O15460 535 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 RRP9O43818 475 aaKnown RBP18.1■□□□□ 0.49
CCDC40-201ENST00000269318 TFRCP02786 760 aaKnown RBP18.1■□□□□ 0.49
CCDC40-201ENST00000269318 POLGP54098 1239 aaPredicted RBP18.1■□□□□ 0.49
CCDC40-201ENST00000269318 TARBP2Q15633 366 aaKnown RBP18.1■□□□□ 0.49
CCDC40-201ENST00000269318 LY6KQ17RY6 165 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 MAP1SQ66K74 1059 aaPredicted RBP18.1■□□□□ 0.49
CCDC40-201ENST00000269318 TRIM58Q8NG06 486 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 IFT74Q96LB3 600 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 FBXL18Q96ME1 805 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 STK33Q9BYT3 514 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 GPR88Q9GZN0 384 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 HDAC6Q9UBN7 1215 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 APEX2Q9UBZ4 518 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 F8VZ95 297 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 PMM2O15305 246 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 CYP2C8P10632 490 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 ANXA13P27216 316 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 ENOX2Q16206 610 aaKnown RBP18.1■□□□□ 0.49
CCDC40-201ENST00000269318 FBXO38Q6PIJ6 1188 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 CBWD2Q8IUF1 395 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 SEPT1Q8WYJ6 367 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 PORCNQ9H237 461 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 DNAJC12Q9UKB3 198 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 PNMA3Q9UL41 463 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 NENFQ9UMX5 172 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 CLEC11AQ9Y240 323 aa18.1■□□□□ 0.49
CCDC40-201ENST00000269318 GOLGA8IPA6NC78 632 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 GOLGA8JA6NMD2 632 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 H0YCG3 227 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 N4BP1O75113 896 aaKnown RBP18.09■□□□□ 0.49
CCDC40-201ENST00000269318 MOCS3O95396 460 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 H2AFXP16104 143 aaPredicted RBP18.09■□□□□ 0.49
CCDC40-201ENST00000269318 TCF7P36402 384 aaPredicted RBP18.09■□□□□ 0.49
CCDC40-201ENST00000269318 ARL2P36404 184 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 STAT1P42224 750 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 SNRNP35Q16560 246 aaKnown RBP18.09■□□□□ 0.49
CCDC40-201ENST00000269318 EPC2Q52LR7 807 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 BRDTQ58F21 947 aaPredicted RBP18.09■□□□□ 0.49
CCDC40-201ENST00000269318 KCNV1Q6PIU1 500 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 GTF3C2Q8WUA4 911 aaPredicted RBP18.09■□□□□ 0.49
CCDC40-201ENST00000269318 MS4A4AQ96JQ5 239 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.09■□□□□ 0.49
CCDC40-201ENST00000269318 PDCL3Q9H2J4 239 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 KCNG1Q9UIX4 513 aa18.09■□□□□ 0.49
CCDC40-201ENST00000269318 LOC102724159A0A0B4J2E5 919 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 TACC1O75410 805 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 PNMA6AP0CW24 399 aaPredicted RBP18.08■□□□□ 0.49
CCDC40-201ENST00000269318 FERP16591 822 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 ABCD1P33897 745 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 SOX5P35711 763 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 GCLMP48507 274 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 STAT5BP51692 787 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 CHMP4BP1P59074 171 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 PWP2Q15269 919 aaKnown RBP18.08■□□□□ 0.49
CCDC40-201ENST00000269318 FAM160B1Q5W0V3 765 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 PHLDB3Q6NSJ2 640 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 RNF10Q8N5U6 811 aaKnown RBP18.08■□□□□ 0.49
CCDC40-201ENST00000269318 ASAP3Q8TDY4 903 aa18.08■□□□□ 0.49
CCDC40-201ENST00000269318 GOLGA1Q92805 767 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms