RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PHF20L1A8MW92 1017 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 DHX15O43143 795 aaKnown RBP14.01□□□□□ -0.17
CPSF6-201ENST00000266679 RAD51CO43502 376 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 GALCP54803 685 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 TNNC1P63316 161 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 MRPS9P82933 396 aaKnown RBP14.01□□□□□ -0.17
CPSF6-201ENST00000266679 TRMT1LQ7Z2T5 733 aaKnown RBP14.01□□□□□ -0.17
CPSF6-201ENST00000266679 PEX26Q7Z412 305 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 MCF2L2Q86YR7 1114 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 CASKIN2Q8WXE0 1202 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 PBKQ96KB5 322 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 CCDC43Q96MW1 224 aaKnown RBP14.01□□□□□ -0.17
CPSF6-201ENST00000266679 SEPT11Q9NVA2 429 aaKnown RBP14.01□□□□□ -0.17
CPSF6-201ENST00000266679 APEX2Q9UBZ4 518 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 UBIAD1Q9Y5Z9 338 aa14.01□□□□□ -0.17
CPSF6-201ENST00000266679 CES2O00748 559 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 LRRN2O75325 713 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 CAPN15O75808 1086 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 MYCLP12524 364 aaPredicted RBP14□□□□□ -0.17
CPSF6-201ENST00000266679 KRT13P13646 458 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 DLG4P78352 724 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 SPP2Q13103 211 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 PAK2Q13177 524 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 MTMR1Q13613 665 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 UGCGQ16739 394 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 SAPCD2Q86UD0 394 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 SLC30A5Q8TAD4 765 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 SYTL5Q8TDW5 730 aaPredicted RBP14□□□□□ -0.17
CPSF6-201ENST00000266679 TAAR1Q96RJ0 339 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 EMSYQ7Z589 1322 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 IGSF9BQ9UPX0 1349 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 A0A0A6YYK5 440 aaPredicted RBP14□□□□□ -0.17
CPSF6-201ENST00000266679 TULP1O00294 542 aaPredicted RBP14□□□□□ -0.17
CPSF6-201ENST00000266679 HSF2BPO75031 334 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 FAM153BP0C7A2 387 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 RARRES1P49788 294 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 MAP3K10Q02779 954 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 FAM153CQ494X1 144 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 PCNX4Q63HM2 1172 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 NIPA1Q7RTP0 329 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 DAAM2Q86T65 1068 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 SLC9A9Q8IVB4 645 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 METTL13Q8N6R0 699 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 ACCSQ96QU6 501 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 RUFY1Q96T51 708 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 FAM153AQ9UHL3 310 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 INTUQ9ULD6 942 aa14□□□□□ -0.17
CPSF6-201ENST00000266679 NOC2LQ9Y3T9 749 aaKnown RBP14□□□□□ -0.17
CPSF6-201ENST00000266679 NCANO14594 1321 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 GOLGA6CA6NDK9 693 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 GOLGA6DP0CG33 693 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 ABCB4P21439 1286 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 QARSP47897 775 aaKnown RBP13.99□□□□□ -0.17
CPSF6-201ENST00000266679 GUCY2FP51841 1108 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 NNTQ13423 1086 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 ANGEL2Q5VTE6 544 aaKnown RBP13.99□□□□□ -0.17
CPSF6-201ENST00000266679 TNS4Q8IZW8 715 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 LMBR1Q8WVP7 490 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 CBWD1Q9BRT8 395 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 AP1M1Q9BXS5 423 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 SLC38A10Q9HBR0 1119 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 OSGEPQ9NPF4 335 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 GOLGA6AQ9NYA3 693 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 LARSQ9P2J5 1176 aaKnown RBP13.99□□□□□ -0.17
CPSF6-201ENST00000266679 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
CPSF6-201ENST00000266679 STXBP5LQ9Y2K9 1186 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 CTDP1Q9Y5B0 961 aaPredicted RBP13.99□□□□□ -0.17
CPSF6-201ENST00000266679 PARP14Q460N5 1801 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 PGRMC1O00264 195 aaKnown RBP13.99□□□□□ -0.17
CPSF6-201ENST00000266679 BACH1O14867 736 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 PLS3P13797 630 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 TNFAIP3P21580 790 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 TRADDQ15628 312 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 PHLDB3Q6NSJ2 640 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 SLFN11Q7Z7L1 901 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 ZSWIM2Q8NEG5 633 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 FAM76AQ8TAV0 307 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 LPAR1Q92633 364 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 DCPSQ96C86 337 aaKnown RBP13.99□□□□□ -0.17
CPSF6-201ENST00000266679 GPRC5CQ9NQ84 441 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 WBP1LQ9NX94 342 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 TMEM59LQ9UK28 342 aa13.99□□□□□ -0.17
CPSF6-201ENST00000266679 ZBTB48P10074 688 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-201ENST00000266679 YWHABP31946 246 aaKnown RBP13.98□□□□□ -0.17
CPSF6-201ENST00000266679 VAMP7P51809 220 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-201ENST00000266679 RPS6P62753 249 aaKnown RBP13.98□□□□□ -0.17
CPSF6-201ENST00000266679 MTMR2Q13614 643 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 PGM5Q15124 567 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 PLA2G4FQ68DD2 849 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 NT5DC3Q86UY8 548 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 ARHGEF19Q8IW93 802 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 SYCE1Q8N0S2 351 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 PROCA1Q8NCQ7 364 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-201ENST00000266679 ACTRT1Q8TDG2 376 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 ARHGEF26Q96DR7 871 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 TEPSINQ96N21 525 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 SYT11Q9BT88 431 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 KIAA1683Q9H0B3 1180 aa13.98□□□□□ -0.17
CPSF6-201ENST00000266679 TMEM206Q9H813 350 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms