RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 WDR24Q96S15 920 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 CHP1Q99653 195 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 MAD2L2Q9UI95 211 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 DCCP43146 1447 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 FASTKD5Q7L8L6 764 aaKnown RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 TACO1Q9BSH4 297 aaKnown RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 KCNF1Q9H3M0 494 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 CPSF3Q9UKF6 684 aaKnown RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 MROH2AA6NES4 1674 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 NEURL4Q96JN8 1562 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 NR3C2P08235 984 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 NAA30Q147X3 362 aaPredicted RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 ARL13BQ3SXY8 428 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 TMEM39BQ9GZU3 492 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 PACSIN2Q9UNF0 486 aaPredicted RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 RRP15Q9Y3B9 282 aaKnown RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 HMGB1P1B2RPK0 211 aaPredicted RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 C19orf81C9J6K1 198 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 SLC16A3O15427 465 aaKnown RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 DGAT1O75907 488 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 CLTAP09496 248 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 CCZ1BP86790 482 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 CCZ1P86791 482 aaPredicted RBP14.97□□□□□ -0.01
CDH3-201ENST00000264012 NR1I3Q14994 352 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 BEST2Q8NFU1 509 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 RFFLQ8WZ73 363 aa14.97□□□□□ -0.01
CDH3-201ENST00000264012 UBE2Q2LH0YL09 131 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 HUS1O60921 280 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 GYS1P13807 737 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 FXR1P51114 621 aaKnown RBP eCLIP14.96□□□□□ -0.01
CDH3-201ENST00000264012 TFDP2Q14188 446 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 XKR3Q5GH77 459 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 C6orf118Q5T5N4 469 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 E4F1Q66K89 784 aaPredicted RBP14.96□□□□□ -0.01
CDH3-201ENST00000264012 TRIM42Q8IWZ5 723 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 TIPINQ9BVW5 301 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 DDX47Q9H0S4 455 aaKnown RBP14.96□□□□□ -0.01
CDH3-201ENST00000264012 ELP3Q9H9T3 547 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 PLAAQ9Y263 795 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 MAP2P11137 1827 aaKnown RBP14.96□□□□□ -0.01
CDH3-201ENST00000264012 ASB14A6NK59 587 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 TXNDC9O14530 226 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 ADCY2Q08462 1091 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 CCDC38Q502W7 563 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 BZW1Q7L1Q6 419 aaKnown RBP14.96□□□□□ -0.01
CDH3-201ENST00000264012 PPLO60437 1756 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 MST1RQ04912 1400 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 ATP1A1P05023 1023 aaKnown RBP14.96□□□□□ -0.01
CDH3-201ENST00000264012 PLCB4Q15147 1175 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 RNF149Q8NC42 400 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 RNF25Q96BH1 459 aaPredicted RBP14.96□□□□□ -0.01
CDH3-201ENST00000264012 IRX2Q9BZI1 471 aaPredicted RBP14.96□□□□□ -0.01
CDH3-201ENST00000264012 ASNSD1Q9NWL6 643 aa14.96□□□□□ -0.01
CDH3-201ENST00000264012 SART1O43290 800 aaKnown RBP14.96□□□□□ -0.02
CDH3-201ENST00000264012 MYCP01106 439 aaPredicted RBP14.96□□□□□ -0.02
CDH3-201ENST00000264012 ANXA13P27216 316 aa14.96□□□□□ -0.02
CDH3-201ENST00000264012 EFNA5P52803 228 aa14.96□□□□□ -0.02
CDH3-201ENST00000264012 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.96□□□□□ -0.02
CDH3-201ENST00000264012 NCAPGQ9BPX3 1015 aa14.96□□□□□ -0.02
CDH3-201ENST00000264012 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.96□□□□□ -0.02
CDH3-201ENST00000264012 POLLQ9UGP5 575 aa14.96□□□□□ -0.02
CDH3-201ENST00000264012 MRFAP1Q9Y605 127 aa14.96□□□□□ -0.02
CDH3-201ENST00000264012 SLC26A4O43511 780 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 TXNP10599 105 aaKnown RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 CLNS1AP54105 237 aaKnown RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 HDLBPQ00341 1268 aaKnown RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 ASPHQ12797 758 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 DUOXA2Q1HG44 320 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 ANGEL2Q5VTE6 544 aaKnown RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 TTC13Q8NBP0 860 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 NUF2Q9BZD4 464 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 GINM1Q9NU53 330 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 ITIH6Q6UXX5 1313 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 ESYT3A0FGR9 886 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 GPC4O75487 556 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 KCNJ6P48051 423 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 FXR2P51116 673 aaKnown RBP eCLIP14.95□□□□□ -0.02
CDH3-201ENST00000264012 MAP3K21Q5TCX8 1036 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 LMBRD2Q68DH5 695 aaPredicted RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 TXNRD3Q86VQ6 643 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 EFCAB13Q8IY85 973 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 CFAP36Q96G28 342 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 HSPBP1Q9NZL4 362 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 M0QYV0 167 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 CA4P22748 312 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 KCNV1Q6PIU1 500 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 PCGF5Q86SE9 256 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 CFAP61Q8NHU2 1237 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 SAYSD1Q9NPB0 183 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 AGPAT5Q9NUQ2 364 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 LCMT1Q9UIC8 334 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 SCAF8Q9UPN6 1271 aaKnown RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 INPP5FQ9Y2H2 1132 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 GGPS1O95749 300 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 CASP7P55210 303 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 PSMC1P62191 440 aaKnown RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 EDRF1Q3B7T1 1238 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 PHLDB3Q6NSJ2 640 aa14.95□□□□□ -0.02
CDH3-201ENST00000264012 GSPT2Q8IYD1 628 aaKnown RBP14.95□□□□□ -0.02
CDH3-201ENST00000264012 MYCBPQ99417 103 aaPredicted RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms