RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 STAT1P42224 750 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 EAPPQ56P03 285 aaPredicted RBP14.04□□□□□ -0.16
SNX1-201ENST00000261889 CCDC26Q8TAB7 109 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 HEMGNQ9BXL5 484 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 NYXQ9GZU5 481 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 ADAM7Q9H2U9 754 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 RIOX1Q9H6W3 641 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 GCLMP48507 274 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 SLC12A3P55017 1021 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 CUL1Q13616 776 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 NUGGCQ68CJ6 796 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 NAIF1Q69YI7 327 aaPredicted RBP14.04□□□□□ -0.16
SNX1-201ENST00000261889 SLC16A10Q8TF71 515 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 PDGFDQ9GZP0 370 aaPredicted RBP14.04□□□□□ -0.16
SNX1-201ENST00000261889 ANKRD2Q9GZV1 360 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 DAGLAQ9Y4D2 1042 aa14.04□□□□□ -0.16
SNX1-201ENST00000261889 H0Y3Z8 333 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 ATP6V1G2O95670 118 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 ZNF543Q08ER8 600 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 PRR5LQ6MZQ0 368 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 DPY19L2P1Q6NXN4 242 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 CD302Q8IX05 232 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 FAM186BQ8IYM0 893 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 NLGN1Q8N2Q7 840 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 AGAP11Q8TF27 550 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 CRAMP1Q96RY5 1269 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 KLHL11Q9NVR0 708 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 SPATA31C1P0DKV0 1188 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 TNFAIP3P21580 790 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 POLLQ9UGP5 575 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 DNM3Q9UQ16 869 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 ALG6Q9Y672 507 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 EZRP15311 586 aaKnown RBP14.03□□□□□ -0.16
SNX1-201ENST00000261889 PREPLQ4J6C6 727 aaPredicted RBP14.03□□□□□ -0.16
SNX1-201ENST00000261889 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 NEK9Q8TD19 979 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 ACTRT1Q8TDG2 376 aa14.03□□□□□ -0.16
SNX1-201ENST00000261889 UBE2TQ9NPD8 197 aaPredicted RBP14.03□□□□□ -0.16
SNX1-201ENST00000261889 RPTORQ8N122 1335 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 PNMA6FA0A0J9YX94 578 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 CCT8L1PA6NM43 557 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 IGF2BP3O00425 579 aaKnown RBP eCLIP14.02□□□□□ -0.16
SNX1-201ENST00000261889 CFBP00751 764 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 PYGMP11217 842 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 CHKAP35790 457 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 PSMC4P43686 418 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 ARHGAP4P98171 946 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 ZDHHC24Q6UX98 284 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 CCDC127Q96BQ5 260 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 TMEM237Q96Q45 408 aa14.02□□□□□ -0.16
SNX1-201ENST00000261889 ARFGEF1Q9Y6D6 1849 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 ENO4A6NNW6 628 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 DDX3YO15523 660 aaKnown RBP14.02□□□□□ -0.17
SNX1-201ENST00000261889 TGFB1I1O43294 461 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 FTLP02792 175 aaPredicted RBP14.02□□□□□ -0.17
SNX1-201ENST00000261889 MRPL12P52815 198 aaKnown RBP14.02□□□□□ -0.17
SNX1-201ENST00000261889 RPAINQ86UA6 219 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 PBKQ96KB5 322 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 FAM129AQ9BZQ8 928 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 RNF14Q9UBS8 474 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 O00370 1275 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 CLDN3O15551 220 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 SPAG7O75391 227 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.17
SNX1-201ENST00000261889 ALDH5A1P51649 535 aaPredicted RBP14.02□□□□□ -0.17
SNX1-201ENST00000261889 PDIA5Q14554 519 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 ERMARDQ5T6L9 678 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 PHLDB3Q6NSJ2 640 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 VPS36Q86VN1 386 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 ERICH1Q86X53 443 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 ARHGEF19Q8IW93 802 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 ERP44Q9BS26 406 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 SAMD15Q9P1V8 674 aa14.02□□□□□ -0.17
SNX1-201ENST00000261889 FAM13AO94988 1023 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 COMTP21964 271 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 SEPT2Q15019 361 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 KYNUQ16719 465 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 KIAA1755Q5JYT7 1200 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 CYP4F22Q6NT55 531 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 CCDC174Q6PII3 467 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 CCDC137Q6PK04 289 aaKnown RBP14.01□□□□□ -0.17
SNX1-201ENST00000261889 SYCP3Q8IZU3 236 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 PRELID2Q8N945 189 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 MICAL1Q8TDZ2 1067 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 DHX38Q92620 1227 aaKnown RBP14.01□□□□□ -0.17
SNX1-201ENST00000261889 CEP63Q96MT8 703 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 C12orf65Q9H3J6 166 aaKnown RBP14.01□□□□□ -0.17
SNX1-201ENST00000261889 ZBTB5O15062 677 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 ANP32DO95626 131 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 KRT16P08779 473 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 PPP1R2P41236 205 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 SSR1P43307 286 aaKnown RBP14.01□□□□□ -0.17
SNX1-201ENST00000261889 MPP2Q14168 576 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 ATXN2LQ8WWM7 1075 aaKnown RBP14.01□□□□□ -0.17
SNX1-201ENST00000261889 DYDC2Q96IM9 177 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 C9orf72Q96LT7 481 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 RMDN2Q96LZ7 410 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
SNX1-201ENST00000261889 WRAP73Q9P2S5 460 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms