RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 COMTP21964 271 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 SP4Q02446 784 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 ORC2Q13416 577 aaPredicted RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 BIRC3Q13489 604 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 BYSLQ13895 437 aaKnown RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 KIAA1755Q5JYT7 1200 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 TTC27Q6P3X3 843 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 PPP4R3CPQ6ZMV5 832 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 TAB3Q8N5C8 712 aaPredicted RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 LENG9Q96B70 501 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 HES6Q96HZ4 224 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 RAB17Q9H0T7 212 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 TDRD3Q9H7E2 651 aaKnown RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 FAM114A2Q9NRY5 505 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 ODF2LQ9ULJ1 636 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 NAV1Q8NEY1 1877 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 DDX3YO15523 660 aaKnown RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 NF2P35240 595 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 PPP1R18Q6NYC8 613 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 CCDC137Q6PK04 289 aaKnown RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 CCDC197Q8NCU1 140 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 KIFC3Q9BVG8 833 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 HEMGNQ9BXL5 484 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 METTL14Q9HCE5 456 aaKnown RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 ABCF3Q9NUQ8 709 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 ASIC3Q9UHC3 531 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 USP20Q9Y2K6 914 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 A6NNZ2 444 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 SKAP2O75563 359 aaPredicted RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 SCP2P22307 547 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 SMARCA1P28370 1054 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 MAP2K1Q02750 393 aaPredicted RBP14.28□□□□□ -0.12
PGBD1-201ENST00000259883 TUBB8Q3ZCM7 444 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 LRIG3Q6UXM1 1119 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 ZDHHC14Q8IZN3 488 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 CBWD1Q9BRT8 395 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 WDR18Q9BV38 432 aa14.28□□□□□ -0.12
PGBD1-201ENST00000259883 PPEF1O14829 653 aaPredicted RBP14.27□□□□□ -0.12
PGBD1-201ENST00000259883 CYP26A1O43174 497 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 SGPL1O95470 568 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 PYGMP11217 842 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 DRD4P21917 467 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 MARSP56192 900 aaKnown RBP14.27□□□□□ -0.12
PGBD1-201ENST00000259883 JAM2P57087 298 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 APOBEC3HQ6NTF7 200 aaKnown RBP14.27□□□□□ -0.12
PGBD1-201ENST00000259883 TATDN2Q93075 761 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 SAAL1Q96ER3 474 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 SLITRK6Q9H5Y7 841 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 GPRC5CQ9NQ84 441 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 FGFR1OP2Q9NVK5 253 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 STXBP5LQ9Y2K9 1186 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 GAKO14976 1311 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 MYO3BQ8WXR4 1341 aa14.27□□□□□ -0.12
PGBD1-201ENST00000259883 CLRN2A0PK11 232 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 CHUKO15111 745 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 CLDN3O15551 220 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 LMNB1P20700 586 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 CRKP46108 304 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 ACCSLQ4AC99 568 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 EP400NLQ6ZTU2 488 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 DHX38Q92620 1227 aaKnown RBP14.27□□□□□ -0.13
PGBD1-201ENST00000259883 PRCCQ92733 491 aaPredicted RBP14.27□□□□□ -0.13
PGBD1-201ENST00000259883 TRIM7Q9C029 511 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 AGPAT3Q9NRZ7 376 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 SAMD15Q9P1V8 674 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 TRIM33Q9UPN9 1127 aa14.27□□□□□ -0.13
PGBD1-201ENST00000259883 COL22A1Q8NFW1 1626 aaPredicted RBP14.26□□□□□ -0.13
PGBD1-201ENST00000259883 IGKV6D-41A0A0C4DH26 115 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 ARP10275 920 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 SMTNP53814 917 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 C10orf76Q5T2E6 689 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 SYDE2Q5VT97 1194 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 C6orf89Q6UWU4 347 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 BARGINQ6ZT62 677 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 HOOK3Q86VS8 718 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 CALR3Q96L12 384 aaKnown RBP14.26□□□□□ -0.13
PGBD1-201ENST00000259883 FBXO28Q9NVF7 368 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 APEX2Q9UBZ4 518 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 ARHGEF35A5YM69 484 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 SLITRK3O94933 977 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 TRIM37O94972 964 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 CCDC172P0C7W6 258 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 NAA25Q14CX7 972 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 ABCB5Q2M3G0 1257 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 HYIQ5T013 277 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 LMBRD2Q68DH5 695 aaPredicted RBP14.26□□□□□ -0.13
PGBD1-201ENST00000259883 PRELID2Q8N945 189 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 ACER1Q8TDN7 264 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 STK33Q9BYT3 514 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 PITPNM2Q9BZ72 1349 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 A8MUI8 341 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 TCP10L2B9ZVM9 353 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 KRT5P13647 590 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 GYS1P13807 737 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 GBP2P32456 591 aaPredicted RBP14.26□□□□□ -0.13
PGBD1-201ENST00000259883 PTENP60484 403 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 DDR1Q08345 913 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 MAPK7Q13164 816 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 FAM47EQ6ZV65 393 aa14.26□□□□□ -0.13
PGBD1-201ENST00000259883 EPM2AIP1Q7L775 607 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms